KEGG   Maridesulfovibrio salexigens: Desal_0821
Entry
Desal_0821        CDS       T00969                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
dsa  Maridesulfovibrio salexigens
Pathway
dsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Desal_0821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsa03019]
    Desal_0821
   03009 Ribosome biogenesis [BR:dsa03009]
    Desal_0821
Enzymes [BR:dsa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Desal_0821
Messenger RNA biogenesis [BR:dsa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Desal_0821
Ribosome biogenesis [BR:dsa03009]
 Prokaryotic type
  rRNA helicases
   Desal_0821
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1
Other DBs
NCBI-ProteinID: ACS78887
UniProt: C6BZ63
Position
complement(917560..919125)
AA seq 521 aa
MEKFRNLGLSDAIIEALEKKGFTAPTPIQEKTIPMLLSGEKDIVGQAQTGTGKTAAFGLP
IIENVREGAGHVQAIVLTPTRELAMQVADEIISFRGSRKVFVATVYGGQPMLPQLKALKR
GADIVVGTPGRVLDHIRRKTLDLSQINNFVLDEADEMCNMGFLEEVSEIMENAGEDRRTL
LFSATMPREVMNIAKKFMGDYDVVSVKREKDEAPLTELIFHEVNERDRFEALCRVVDAQP
EFYGLVFCRTRADADRVAGTLAERGYPAEPIHGDLSQARREDILMRFRKRRCKILVATDV
AARGIDVPDLSHVVNFALPQDPQSFVHRVGRTGRAGKKGVAVTLITPREFGKLRYITKIT
KLRVDKKPLPTIDQVIDVKKSRMGAELSEIVEAGKHLSYLDLAHELLEGVDPIEAVAALL
KHSQGGVLDKRSYRKIEECGGPAANRGRVRFTAHIGRAHGMTPRKLVDMICRRARINPVR
IQHVKIQGRQSTFTVPAGDSDNVMRAVNRASKNERPLLKRG
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggaaaaatttagaaacctcggcctttccgatgccattattgaagcacttgagaaaaaa
ggcttcaccgcgcccacccctattcaggaaaaaaccattcccatgctcctttccggtgaa
aaggacatcgtaggtcaggctcagactggtaccggtaagaccgcagctttcggcctgcct
atcattgaaaatgtccgcgaaggcgcaggacacgttcaggccatcgtcctgacccccacc
cgcgaactggctatgcaggttgcggatgaaatcatttctttccgcggctcacgcaaagtt
ttcgtagccactgtttatggtggacagcccatgcttccgcagctgaaagcactcaaacgc
ggcgcggacatcgttgtcggtactccaggccgtgttctggaccacatccgcagaaagacc
ctcgacctttcccagatcaacaacttcgtactcgatgaagctgacgaaatgtgcaacatg
ggcttccttgaagaagtatccgagatcatggaaaatgccggtgaagatcgccgtaccctg
cttttctccgctaccatgccccgcgaagtaatgaacatcgccaagaaatttatgggcgat
tacgatgtggtttctgtaaagcgcgaaaaagacgaagcaccgctgaccgaactcattttt
cacgaagtaaacgagcgtgaccgttttgaagcactctgccgtgttgttgatgcgcagccc
gaattttacggtctggtcttctgccgcacccgtgcagatgcagaccgcgtagcaggaact
cttgctgagcgcggctaccctgccgaacccattcacggtgatctttctcaggcccgccgc
gaagatatcctcatgcgtttccgcaaacgccgctgtaaaatcctcgtggctaccgacgtt
gccgcccgtggtatcgacgttcccgacctttcacacgttgttaacttcgccctgccgcag
gatccgcagagctttgtgcaccgcgtaggccgtaccggtcgtgctggtaaaaaaggtgtt
gctgtaaccctgattaccccccgcgaattcggtaaactgcgctacatcaccaagatcacc
aagctccgcgtagacaagaaacccctgccgaccatcgatcaggttatcgatgtgaaaaaa
tcccgcatgggtgcagagcttagcgaaatcgttgaagccggcaagcatctttcatacctt
gatctcgcccacgaattgctcgaaggcgttgatcctattgaagctgttgcagcactgctc
aagcattctcagggcggcgttctcgacaaacgcagctaccgtaaaatcgaagagtgcggc
ggacccgcagcaaaccgtggtcgtgtacgcttcaccgcgcacatcggccgtgcacacggc
atgaccccgcgtaaactggtagacatgatctgccgccgcgcacgcatcaaccccgtgcgc
atccagcacgtgaagattcagggacgccagtccaccttcaccgtacccgcaggtgattcc
gataacgtaatgcgcgctgtgaacagggcttccaaaaacgaaagacctttgctcaaacgc
ggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system