KEGG   Maridesulfovibrio salexigens: Desal_2255
Entry
Desal_2255        CDS       T00969                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
dsa  Maridesulfovibrio salexigens
Pathway
dsa02020  Two-component system
dsa02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:dsa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Desal_2255
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Desal_2255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsa03021]
    Desal_2255
Transcription machinery [BR:dsa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Desal_2255
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21
Other DBs
NCBI-ProteinID: ACS80311
UniProt: C6BWN1
Position
complement(2479975..2481390)
AA seq 471 aa
MGLELRQQLKLTQQLVMTPQLQQAIKLLQLSRLELVDTVHQELMENPILEEAEAQERTDS
PDADAGTATAEEAQISKEAEWENYLGEFSSTSKQSASRESESYEEGTSFEARLTKSASLE
GHLHWQMSLSDFTEKDIAIGECLIGNLSSGGFLRIDLEDVCETCYAEIEDVEKVLHRIQR
FDPVGVAARTPQECLLIQLEALKLDDDPILVSLVRDHLDDLEKKRYKPLARKFKLSMEDL
KSYLDLMQTLDPLPGASFSSGDSFYVSPDAYVYEYDGDFVIVLNEDGLPKLQMNAFYVET
LESTKGDDKEYFQDKMRSAQWLMKSLYQRQRTLYKVLESIVRFQREFFAHGVTKLKPLIL
KEVAEDIEMHESTVSRITTNKYVSTPHGIYELKFFFNSALGLDDGSQVGSESVKATIKKL
IGEEDGKKPLSDEKIAEILKEKLEVNIARRTVAKYRTAMGILSSSKRKKVF
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggggttggaacttagacaacaattaaagcttactcaacagctggtaatgactcctcag
ctgcagcaggcgatcaagttgttgcagctttcccgattggagttggtggataccgtccat
caggaactcatggagaatcctatccttgaagaagctgaagctcaggagcgtacggattct
cctgatgctgacgcaggcaccgctactgccgaagaagcacaaatttccaaggaagccgag
tgggagaactatctcggtgaattctccagtacatcaaagcaatcagcttcccgcgagtcg
gaatcttatgaagaaggcacttcctttgaagcccgcctgaccaagtcggcatcccttgaa
gggcatctgcattggcagatgagcctttccgattttactgagaaggatatcgccataggc
gaatgtcttataggtaatttaagttcgggaggttttttacggatagacttggaagatgtc
tgtgaaacatgctatgctgaaatcgaagatgtagaaaaggtattgcatcgcattcagcgg
ttcgatccggtaggcgtagcggcaaggactccgcaggaatgtctgctaattcagctggaa
gcattgaagcttgacgatgatccaattctggtttcgctggtccgggatcatttagatgat
cttgaaaagaagcgctacaagcctctggcaagaaagttcaagctcagcatggaggattta
aagagttatctggacttgatgcagacacttgatccactacccggagcaagtttttcaagt
ggagactctttctatgtcagccctgatgcttatgtttatgaatatgacggtgattttgtc
atagttctgaacgaagacggtcttcctaaattgcaaatgaatgcattttatgtggagact
cttgagtcaaccaagggagatgacaaggaatattttcaagacaagatgcgttccgcacaa
tggctgatgaagagcctgtatcagcggcaacgcaccttatataaggttcttgaatccata
gtgaggtttcagcgcgagtttttcgcccacggtgtcaccaagttaaaaccgcttattctt
aaggaggttgcggaagacatcgagatgcatgaatccactgtgagccgaatcactactaat
aagtatgtttctactccgcatggaatttatgaactgaaattctttttcaatagtgcgctc
ggtctggatgacggttctcaggtcggttccgagtccgtcaaggcgacgatcaagaaattg
atcggtgaagaagacggaaagaaaccactcagcgatgaaaagatagctgagattctcaaa
gagaaactggaagtcaatatagccagaaggaccgtagccaagtacaggactgcaatggga
attctctcctcatccaagaggaaaaaggtattctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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