KEGG   Dinoroseobacter shibae: Dshi_0012Help
Entry
Dshi_0012         CDS       T00612                                 

Gene name
dapE1
Definition
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
Orthology
K01439  
succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
dsh  Dinoroseobacter shibae
Pathway
Lysine biosynthesis
Metabolic pathways
Microbial metabolism in diverse environments
Biosynthesis of amino acids
Module
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dsh00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Dshi_0012 (dapE1)
  Amino acid metabolism
   00300 Lysine biosynthesis
    Dshi_0012 (dapE1)
Enzymes [BR:dsh01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     Dshi_0012 (dapE1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RoseoBase: 
UniProt: 
Position
13129..14268
Genome map
AA seq 379 aa AA seqDB search
MTDPVALTADLIRCPSVTPEEGGALSLLEARLSAAGFACTRVDRNGIANLFARWGEKGHA
RSFGFNGHTDVVPVGARADWRFDPFGAQVEGDWMYGRGAVDMKSAVAAFAAAAMDFVADT
PPDGAVILAITGDEEGDAKDGTVALLDWMAAQGEAMDVCLVGEPTCPDEMGEMMKIGRRG
SMTFFFEALGVQGHSAYPHRAKNPLPALAKLVDRLAGLELDTGTDHFDPSTLAVTTFDTG
NPANNVIPAACRATVNIRFNDAHSSESLTAMVRGIAAEVAAETGIEITDRVSVSGESFIT
PPGRLSDLVAAAVETETGRVPVLSTSGGTSDARFVQHHCPVVEFGLVGKSMHQVDERVAI
AQIPQLKAIYTRILRDYFA
NT seq 1140 nt NT seq  +upstreamnt  +downstreamnt
atgaccgaccctgttgccctgaccgccgatctgatccgctgcccgtccgtgacgcccgag
gagggcggcgcgctgagcctgctggaggcgcggctgtcggcggcgggtttcgcctgcacc
cgggtggaccggaacgggatcgcgaacctctttgcccggtggggcgaaaagggccatgcg
cggagtttcgggttcaacgggcacacggatgtggtgcccgtgggcgcgcgggccgattgg
cggttcgacccgttcggggcgcaggtggagggtgactggatgtatggccggggcgcggtg
gacatgaaatccgccgtggccgcctttgccgccgcggcgatggatttcgtggccgacacg
ccccccgatggcgcggtgatcctggcgatcaccggggacgaggagggcgatgcgaaggac
gggaccgtcgccctgctggactggatggcggcgcagggcgaggcgatggatgtctgcctg
gtgggggagccgacctgcccggacgagatgggcgagatgatgaagatcgggcgccgcggc
tcgatgacgtttttcttcgaggcgctgggcgtgcagggccattccgcctatccgcaccgc
gcgaagaacccgctgcccgcgctggccaagctggtggatcggctggcggggctggagctg
gataccgggaccgatcatttcgatccctcgacgctcgcggtgaccaccttcgacaccggc
aacccggccaataacgtgatcccggcggcgtgccgggccacggtgaacatccggttcaac
gatgcccattcgtcggaaagcctgaccgcgatggtgcgcgggatcgcggcggaggtggcc
gccgagaccgggatcgagatcaccgaccgggtgtcggtctcgggcgagagcttcatcacc
cccccggggcggctgtcggacctggtcgccgcggcggtggagaccgagaccggccgggtg
ccggtgctgtcgacctctggcgggacgtcggacgcgcggttcgtgcagcaccactgcccg
gtggtggagttcggccttgtgggcaagtccatgcaccaggtggacgagcgggtggcgatt
gcccagatcccgcagctcaaggcgatctacacccggatattgcgcgactatttcgcatga

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