KEGG T00612: Dshi

Dinoroseobacter shibae: Dshi_0709

Entry

Dshi_0709 CDS T00612

Gene name

atoDA

Definition

acyl CoA:acetate/3-ketoacid CoA transferase, alpha and subunit beta (EC:2.8.3.8)

Orthology

K01026

propionate CoA-transferase [EC:2.8.3.1]

Organism

dsh Dinoroseobacter shibae

Pathway

dsh00620	Pyruvate metabolism
dsh00640	Propanoate metabolism
dsh00643	Styrene degradation
dsh01100	Metabolic pathways
dsh01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:dsh00620]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:dsh00640]
Metabolism; Xenobiotics biodegradation and metabolism; Styrene degradation [PATH:dsh00643]

SSDB

Motif

Pfam:

CoA_trans AcetylCoA_hydro

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

RoseoBase:

UniProt:

Position

716718..718664

AA seq 648 aa
MPNKQISAAAAAELVRDGDTVTTSGFVGIGVPEELLVALETRFVETAHPRDLTLFFAAGQ
GDGKDRGLNRLGHEGLLARVIGGHWGLIPKVAALATAGKIAAYNLPQGVISHLYRDIAAG
RPGTLSRVGLGTFVDPRLEGGKINDVTHDEIVSVMEVGGAEHLFYRALPVHVALLRGTSA
DPAGNISMEREALVIDNLAQAMAAKNSGGVVIVQVERMVARHGLNPRDVVIPGALVDAVV
VAAPENHHQTFATPYSHAFSGQFRVEADTVPEMPLTPRKVIARRAAFELPINGVVNLGIG
MPEGVAAVAGEEKLLPHLTLTAEPGVIGGQPASGLDFGAAVNTDAIVPQSAQFDFYDGGG
LDIAVLGMAQVDARGNVNVSRFGPKLAGAGGFINISQNARAVVFAGTFTSVGLDLAVSEA
GVEIRSEGRVTKFVEAVEQVTFSGPLAAAAGKKVLYVTERAVFRLRPEGVELVEIAPGID
LERDVLAHMAFAPEMAPEIAEMDARLFAEGPMGLRVDLLHLDLDDRVALSADKAQLFLNF
EKMRVRAPGDVNKVRARVEAVCAPLGHRVDVVANYDGARIDEEVEDAWVAMVQQMEDRFY
GTVTRYSGSAFMRMKLGAAFAREVRPHVFETATEARAFLSAARGGSFL

NT seq 1947 nt +upstreamnt +downstreamnt
atgccgaacaaacagatttcggccgcggcggcggcggagctggtccgcgacggggatacg
gtgacgacctccggcttcgttgggatcggtgtgccggaggaattgctcgtggcgctggag
acccggttcgtcgagaccgcgcacccgcgggacctgacgctgttttttgcggcgggccaa
ggggacggcaaggacagggggctgaaccgtctgggccacgaaggattgctggcgcgggtg
attgggggccactgggggctgatccccaaggtggcggccctggccacggcgggcaagatc
gcggcctataacctgccccagggggtgatcagtcacctttatcgcgacatcgccgcgggc
cggcccggcacgctcagccgggtggggctgggcaccttcgtcgacccgcgcctggagggg
ggcaagatcaacgatgtcacccatgacgagatcgtctcggtgatggaggtaggcggggcg
gaacacctgttctaccgcgccctgccggtgcatgtggccttgctgcgcggcacctccgcc
gacccggcgggcaatatctcgatggagcgcgaggcgctggtgatcgacaaccttgcacaa
gccatggcggcgaaaaactccggcggggtggtgatcgtgcaggtcgagcgcatggtggcg
cgccacgggctcaacccgcgcgacgtggtgatccccggggcgctggtggacgcggtggtg
gtggccgcccccgagaaccaccaccagaccttcgccacgccctacagccacgcgttttcc
ggtcagttccgggtggaggcggacaccgtgcccgagatgccgttgaccccgcgcaaggtg
atcgcccggcgcgcggccttcgagttgccgatcaacggggtggtgaacctcgggatcggg
atgcccgagggggtggccgccgtggccggggaggagaagctcttgccgcatctgaccctg
accgccgagccgggggtgatcggcgggcagccggcctcggggctggatttcggagccgcg
gtgaatacggacgcgatcgtgccgcaatcggcgcagttcgatttctacgatggcgggggg
ctggatatcgcggtgctgggcatggcgcaggtggacgcgcgcggcaatgtgaacgtctcg
cgtttcgggcccaagctcgccggggcgggcgggttcatcaatatcagccagaacgcccgg
gcggtggtgttcgcgggcaccttcacctccgttggattggacctggccgtgtcggaggcg
ggggtggagatccggtccgagggccgggtgaccaagttcgtcgaggcggtggagcaggtg
accttttccggcccgcttgcggcggcggcgggcaagaaggtgctctatgtcaccgagcgc
gcggtctttcggctccgccccgaaggggtggaactggtcgagatcgcgccggggatcgac
ctggagcgggacgtactggcccacatggctttcgcgccggaaatggccccggagattgcc
gagatggacgcgcggctctttgccgaggggccgatgggattgcgggtggacctgctgcat
ctggacctcgatgaccgcgtggcgctgtcggcggacaaggcgcagctgttcctgaatttc
gagaagatgcgggtgcgcgcgcccggcgacgtgaacaaggtccgcgcccgggtcgaggcg
gtctgcgcgccgctggggcaccgggtggacgtggtcgccaattacgacggggcgcggatc
gacgaggaggtcgaggacgcctgggtggcgatggtgcagcagatggaagaccgcttctac
gggacggtgacgcggtattcgggctccgccttcatgcggatgaagctcggcgcggccttc
gcccgggaggtgcgcccccatgtgttcgagaccgcgaccgaggcgcgcgccttcctgtcg
gcggcgcggggtggatcgtttctgtga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DSH (1)   
   OC (1)   
   ROSEOBASE-DSH (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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