KEGG   Dinoroseobacter shibae: Dshi_0835Help
Entry
Dshi_0835         CDS       T00612                                 

Gene name
fadJ
Definition
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 5.1.2.3)
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
dsh  Dinoroseobacter shibae
Pathway
Fatty acid metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Module
beta-Oxidation
Class
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:dsh00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:dsh00650]
Metabolism; Lipid metabolism; Fatty acid metabolism [PATH:dsh00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:dsh01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:dsh00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:dsh00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:dsh00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:dsh00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:dsh00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:dsh00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:dsh00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RoseoBase: 
UniProt: 
Position
complement(844051..846264)
Genome map
AA seq 737 aa AA seqDB search
MNDMTDFTMKTDADGVAIITWDVQGKSMNVMNQQGFEDLDALVDKALADDTVKGIIITSG
KDSFAGGMDLNVIAKMRDDAGDDPARGLFEGVMAMHGILRKIERAGMDPKTNKGGKPVAA
ALPGTALGIGLEIPLACHRIFAADNPKAKIGLPEIMVGIFPGAGGTMRVSRKLGAMQAAP
ILLEGKLFEPKKAKMAGIVDEVVPAEELLDAAKAWVLSAKDTDIVKPWDLKGYKFPGGAP
YHPAGFMTFVGASAMIHSKTMGVYPAAKALLSAVYEGAMVPFDTALKIEARWFTNVLMNP
SSSAMIRSLFINKEALEKGAVRPDVPDQKVKKVGILGAGMMGAGIAYVSANAGIEVVLID
AAQESADRGKAHAAGILDKGIARKKVTPEKKDEVLARITATTDYAALEGCDLVVEAVFED
PGVKAEVTAKAEAVIPGDAIFATNTSTLPISELAKASARPEQFIGIHFFSPVDKMLLVEI
IKGRQTGDVAVAKALDFVRQIRKTPIVVNDARFFYANRCIIPYINEGIRMVAEGVTPALV
ENAAKLVGMPLGPLQLVDETSIDLGVKIAKATKAAMGDAYPDGAVDEVLFWMADEGRLGR
KSNAGFYTYDEAGKRGLLWEGLADRYPAAKEQPELTAVQHRLLMAQVLEAVRALEDGVLM
DIREGDVGAILGWGFAPWSGGPLSWLDMIGAARAVEICDALTDTHGARFTTPALLREMAE
KGETFYGRFGAETRKAA
NT seq 2214 nt NT seq  +upstreamnt  +downstreamnt
atgaacgacatgaccgatttcaccatgaaaacggacgccgacggcgtcgccatcatcact
tgggacgtccagggcaaatccatgaacgtcatgaaccagcaagggttcgaggatctcgac
gcgctggtcgacaaggcgctggccgatgacaccgtcaaggggatcatcatcacctccggc
aaggacagctttgcgggcggcatggacctcaacgtcatcgccaagatgcgcgacgacgcc
ggcgacgacccggcccgtggcctcttcgagggcgtgatggccatgcacggcatcctgcgc
aagatcgagcgcgccgggatggaccccaagaccaacaagggcggcaaacccgtcgccgcc
gccctgcccggcaccgcgctcggcatcgggctggagatcccgctcgcctgtcaccggatt
ttcgccgccgacaaccccaaggccaagatcggcctgcccgaaatcatggtcggcatcttc
cccggcgcgggcggcaccatgcgggtgtcgcgcaagctgggcgcgatgcaggctgcgccc
atcctgctcgaaggcaagcttttcgagccgaaaaaggccaagatggccggcatcgtggac
gaagtggtgcccgcggaggagctgctcgacgccgccaaggcctgggtgctctccgccaag
gatactgatatcgtcaagccctgggacctcaagggctacaagttccccggcggcgcgccc
taccacccggcgggcttcatgaccttcgtcggcgccagcgccatgatccattccaagacc
atgggcgtctacccggcggccaaggcgctgctgagtgcggtctacgaaggggccatggtt
cccttcgacaccgcgctcaagatcgaggcgcgctggttcaccaacgtcctgatgaacccg
tcgtccagcgccatgatccgctcgctcttcatcaacaaggaggcgctggaaaaaggcgcc
gtccgtcccgacgtgcccgaccagaaggtgaagaaggtcggcatcctcggcgcggggatg
atgggcgcgggcatcgcctatgtctcggccaatgccgggattgaagtggtgctgatcgac
gccgcccaagagtccgcggatcgcgggaaggcccatgccgcgggcatcctcgacaagggc
atcgcgcgcaagaaggtcacgcccgagaagaaggacgaggtgctcgcccgcatcaccgcc
accacggactatgccgccctcgaagggtgcgacctggtggtcgaggcggtgttcgaagat
ccgggcgtcaaggccgaggtgaccgcaaaggccgaagccgtgatccccggcgatgcgatc
ttcgcgaccaacacctccaccctgccgatctcggagctggccaaggccagcgcccggcct
gagcagttcatcggcatccatttcttttcgcccgtggacaagatgctgctggtggagatc
atcaaggggagacagaccggcgatgtggccgtggccaaggcgctcgatttcgtgcgccag
atccgcaagacgcccatcgtggtcaacgacgcgcggttcttctacgccaaccgctgcatc
attccctacatcaacgaaggcatccgcatggtggccgagggcgtcaccccggcgctggtc
gaaaacgctgcgaaactggtgggcatgccgctggggccgctgcaactggtggacgaaacc
tccatcgacctgggcgtcaagatcgccaaggccacgaaagcggccatgggcgacgcctac
ccggacggcgccgtggacgaggtgctgttctggatggcggacgaaggccgcctgggccgc
aagtccaatgcgggcttctacacctatgacgaggcgggcaagcgtggtctgctctgggaa
gggctggccgaccgctacccggcggccaaggaacagcccgagctgaccgccgtgcagcac
cgcctgctcatggcccaggtgctggaggccgtgcgcgccctggaggacggcgtgctcatg
gacatccgcgagggcgacgtgggcgccatcctcggctggggcttcgcgccgtggtccggt
ggcccgctcagctggctcgacatgatcggcgccgcccgcgcggtggagatctgcgatgcg
ctgaccgacacccacggcgcccgcttcaccacgcccgcgctcctgcgcgaaatggccgag
aagggcgagaccttctatggccgcttcggggcggagacccgcaaagccgcctga

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