KEGG   Dinoroseobacter shibae: Dshi_1996Help
Entry
Dshi_1996         CDS       T00612                                 

Gene name
xylA
Definition
xylose isomerase (EC:5.3.1.5)
Orthology
K01805  
xylose isomerase [EC:5.3.1.5]
Organism
dsh  Dinoroseobacter shibae
Pathway
Pentose and glucuronate interconversions
Fructose and mannose metabolism
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dsh00001]
 Metabolism
  Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    Dshi_1996 (xylA)
   00051 Fructose and mannose metabolism
    Dshi_1996 (xylA)
Enzymes [BR:dsh01000]
 5. Isomerases
  5.3  Intramolecular oxidoreductases
   5.3.1  Interconverting aldoses and ketoses, and related compounds
    5.3.1.5  xylose isomerase
     Dshi_1996 (xylA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RoseoBase: 
UniProt: 
Position
complement(2114512..2115816)
Genome map
AA seq 434 aa AA seqDB search
MSDFFAGIPAVTYEGPEARSDFAFRHYNPDEMVMGKRMEDQLRFAVAWWHSFAWEGGDPF
GGPTFQRPWFGDTLDHARAKADAAFEMFRILNVPFYCFHDADIRPEGASFAETTANLEAM
VDYLGQKQEASGKRLLWGTANLFSHRRYMAGAATNPDPDVFAYAAATIKTCMDATHKLGG
ANYVLWGGREGYETLLNTDLGREREQAGRMLQMVVDYKHKIGFEGTILLEPKPQEPTKHQ
YDYDVATVFSFLSEFGLQDEVKMNIEQGHAILAGHSFEHELALAREFGILGSIDMNRNDY
QSGWDTDQFPNNIPEVALAYYEILRAGGFDTGGTNFDSKLRRQSLDPADLIAAHVAAMDV
CAAGLKAAARMLEDGELEQRREDRYAGWRAPSAEAMLNGGKLEDCFAHVMETGLDPQPVS
GGQERLEALVARYL
NT seq 1305 nt NT seq  +upstreamnt  +downstreamnt
atgagcgattttttcgcggggatccccgccgtcacctatgaaggccccgaggcccgcagc
gacttcgccttccggcactacaaccccgacgagatggtcatgggcaagcggatggaggat
cagctgcgcttcgccgtggcctggtggcattcctttgcttgggaagggggcgacccgttc
ggcggtccgaccttccagcgcccgtggttcggcgacaccctggatcatgcccgcgccaag
gccgatgcggcgttcgagatgttccgcatcctgaacgtgccgttctattgcttccacgac
gccgatatccgccccgagggcgcgagtttcgccgagaccaccgcgaaccttgaagcgatg
gtggactacctgggccagaagcaggaggcgagcggcaagcggctgctctggggcaccgcg
aacctgttctcgcaccggcgctacatggctggggcggcgacgaacccggacccggatgtg
ttcgcctatgccgccgccaccatcaagacctgcatggacgcgacccacaaactgggcggc
gcgaattatgtcctgtggggcgggcgcgaggggtacgagaccctgctcaacaccgatctg
gggcgcgagcgggagcaggcgggccggatgctgcagatggttgtggattacaagcacaag
atcgggttcgagggcacgatcctgctggagccgaaaccgcaggagcccacgaagcaccaa
tatgattacgacgtggccacggtgttcagctttctgtcggagttcggcctgcaggacgag
gtgaagatgaatatcgagcagggccatgcgatcctggccgggcattccttcgagcatgag
ctggcgctggcgcgggagttcgggatcctgggctccatcgacatgaaccgcaacgattac
cagtcgggctgggacaccgaccagttcccgaacaacatccccgaggtggcgctggcctat
tacgagatcctgcgcgcgggcggcttcgataccgggggcaccaatttcgattccaagctg
cggcggcaatcgctggacccggcggacctgatcgcggcccatgtggcggcgatggatgtc
tgtgccgcggggctgaaggcggcggcacggatgctggaggatggcgagttggagcagcgg
cgcgaggatcgctatgcgggctggcgcgcgccctcggcggaagcgatgctgaacggtggc
aagctggaggactgctttgcccatgtgatggagaccgggcttgatccgcagccggtctcg
ggcgggcaggaacggctggaggcgctggtcgcgcgatacctgtaa

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