KEGG   Dinoroseobacter shibae: Dshi_2727
Entry
Dshi_2727         CDS       T00612                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Dshi_2727 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsh03400]
    Dshi_2727 (xseA)
Enzymes [BR:dsh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Dshi_2727 (xseA)
DNA repair and recombination proteins [BR:dsh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Dshi_2727 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Gly_transporter
Other DBs
NCBI-ProteinID: ABV94460
RoseoBase: Dshi_2727
UniProt: A8LIL9
Position
complement(2888799..2890370)
AA seq 523 aa
MSDFDLIDDPQPGQNAPEFTVSELSGAIKRTLEGEFGRVRVRGEIGRVMRAKSGHLYFDL
KDARAVINCTTWKGQVSGLGVMPEEGLEVVAEGKLSAYAPASRYNINVDRISVAGIGALM
AMLEKRKAALTAEGLFEASRKQPLPFLPEVIGVVTSPSGAVIRDILHRLRDRCPRKVLIW
PVAVQGQNCAPEVANAIRGFNALGPGGPLPRPDLLIVARGGGSLEDLWGFNEEIVVRAAA
ESDIPLISAVGHETDTTLIDYAADWRAPTPTAAAERAVPVRLDLLAALDSLGSRMLTGLT
GGVRARAQRVRDLSRALPRSEDLLSTPRQRLDHATARLPAALRSATQTKRGALTQAAAVL
RPRLLAGRIEAERKDLRAASARLGAALPRAVAAQAERLRTRVARLRGEILTQGRARDQQR
LEALSARLSRAGTAQVRTWRRTLDGLDRVRATVGYEATLKRGYAVVRDQDSIVTTAAAAA
THPSLEVQFADGRVTVIPNASAEGARPRKGRSKSAPDDQGSLF
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgtccgatttcgatctgatcgacgatccccagccggggcagaacgcgccggaattcacg
gtgtccgagttgtcgggcgcgatcaagcgcaccctggagggcgaattcggccgcgtccgc
gtcaggggcgagatcgggcgggtgatgcgcgccaagtcgggccacctctatttcgacctc
aaggatgcccgcgccgtgatcaattgcaccacctggaaagggcaggtgtcgggcctgggc
gtaatgcccgaagaggggctggaggtcgtggccgagggcaagctgagcgcgtatgcgccc
gcctcgcgctacaatatcaacgtggaccggatctcggtggccgggatcggcgcgctcatg
gcgatgctggagaagcgcaaggccgcactgacggccgagggcctgttcgaggcgtcgcgc
aagcagccgctgcccttcctgcccgaggtgatcggggtcgtgaccagcccttcgggcgcg
gtgatccgcgacatcctgcaccggctgcgcgaccgttgcccgcgcaaggtgctgatctgg
ccggtggcggtgcaggggcagaactgcgcgcccgaggtggcgaatgccatccgcggcttc
aatgcgcttggccccggcgggccgttgccgcgcccggacctgctgatcgtggcgcgcggt
ggcggcagcctggaggatctctgggggttcaacgaggaaatcgtggtccgcgcggcggcc
gagagcgatatccccctgatctccgccgtggggcacgagacggacacgacgctgatcgat
tacgccgccgattggcgcgcgcccacgcccacggcagcggccgagcgcgccgtgccggtg
cggctcgacctgttggccgccctggacagcctggggtcgcggatgctgaccgggctgacc
ggcggggtgcgcgcgcgggcgcagcgggtgcgtgacctgtcgcgggctttgccgcgcagc
gaggatttgctgagcaccccgcgccagcggctcgaccatgcaacggcgcgcctgcccgcg
gcgctgcgcagtgccacccagaccaagcgcggcgcgctcacccaggccgcggcggtgctg
cgcccccggctcctcgcgggccggatcgaggccgagcgcaaggatctgcgtgcggccagc
gcgcggctcggcgcggccctgccgcgcgcggtcgctgcgcaggcggagcgcctgagaaca
cgcgtggcccggctacggggcgagattttgacccaggggcgcgcccgcgatcagcagcgg
ctggaggccctctcggcccgcctgtcccgggcaggcacggcccaagtccggacctggcgc
agaacactcgacgggctcgaccgggtgcgcgccaccgtgggctacgaggcgaccctcaag
cgtggctacgccgtggtccgcgaccaggacagcatcgtcaccaccgccgcggccgcggca
acccatcccagcctggaggtacaattcgccgatggccgcgtgaccgtgatcccgaacgcc
tccgccgagggcgccaggccccgaaagggccggtcgaaatccgccccggacgaccaaggc
tcgcttttctga

DBGET integrated database retrieval system