KEGG D.shibae: Dshi

Dinoroseobacter shibae: Dshi_2936

Entry

Dshi_2936 CDS D.shibae

Gene name atpA1

Definition ATP synthase subunit alpha (EC:3.6.3.14)

Orthology K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]

Pathway dsh00190 Oxidative phosphorylation
dsh01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Oxidative phosphorylation
[PATH:dsh00190]
Metabolism; Energy Metabolism; Photosynthesis proteins

SSDB

Motif Pfam: ATP-synt_ab ATP-synt_ab_C ATP-synt_ab_N HAS-barrel Arch_ATPase
DnaG_DnaB_bind
PROSITE: ATPASE_ALPHA_BETA

Other DBs NCBI-GI: 159045476
NCBI-GeneID: 5710787
JGI: Dshi2936
RoseoBase: Dshi_2936
UniProt: A8LJR6

Position complement(3092718..3094256)

AA seq 512 aa
MGIQAAEISAILKEQIKNFGQEAEVAEVGRVLSVGDGIARVHGLDNVQAGEMVEFPGGIR
GMALNLEIDNVGVVIFGSDRDIKEGDIVKRTKSIVDVPVGDALLGRVVDGLGNPLDGKGP
IETTERSIADVKAPGIIPRKSVHEPMATGLKSVDAMIPIGRGQRELIIGDRQTGKTAVAL
DTILNQKAYNDAAGDDESKKLYCVYVAVGQKRSTVAQLVKKLEETGAIEYSIVVAATASD
PAPMQFLAPYAATSMAEFFRDNGRHALIIYDDLSKQAVSYRQMSLLLRRPPGREAYPGDV
FYLHSRLLERSAKLGDDHGNGSLTALPIIETQGGDVSAFIPTNVISITDGQIFLETELFY
QGIRPAVNTGLSVSRVGSSAQTNAMKSVAGPVKLELAQYREMAAFAQFGSDLDAATQQLL
NRGARLTELMKQPQYSPLTNAEIVCVIFAGTKGYLDKIPVGDVGRYEKGLLAHLRGKHKG
LLDYITKEDPKIKGEAEDKIRAALDEFAATFA

NT seq 1539 nt +upstreamnt +downstreamnt
atgggaatccaagctgccgaaatctctgcgatcctcaaggagcagatcaagaactttggc
caggaagccgaagtcgccgaggtgggccgcgtgctcagcgtcggcgacgggattgcacgg
gtccacgggctggacaacgtgcaggccggtgaaatggtcgagttcccgggcggcatccgc
gggatggccctgaacctcgaaatcgacaatgtgggtgtcgtgatcttcggctcggaccgg
gacatcaaggaaggcgacatcgtcaagcgcaccaagtccatcgtggacgtgcccgtgggc
gacgcgctgctgggccgggtcgtggatggcctgggcaacccgctggacggcaagggcccg
atcgagaccaccgagcgcagcatcgcggacgtgaaggcgccgggcatcatcccgcgcaaa
tccgtgcatgagccgatggcgaccggcctgaaatctgtcgacgccatgatcccgatcggg
cgcggccagcgcgagctgatcatcggcgaccgccagaccggcaagaccgccgtggcgctc
gacacgatcctgaaccagaaggcctataacgacgccgccggcgacgacgagagcaagaag
ctctactgcgtctacgtggccgtggggcagaagcgctccaccgtggcgcagctggtcaag
aagctcgaagaaactggtgccatcgaatactccatcgtcgtggccgccaccgcctccgac
ccggcgccgatgcagttcctcgcaccctatgccgcgacctccatggcggaattcttccgc
gacaatggccgccatgcgctgatcatctatgatgacctctcgaagcaggccgtgtcttac
cgtcagatgtcgctgctgctgcgtcgcccgccgggccgcgaagcctatccgggcgacgtg
ttctacctgcactcccgcctgctggagcggtcggcgaagctgggcgacgatcatggcaac
gggtcgctgaccgcgctgccgatcatcgaaacgcaaggcggcgacgtgtcggcctttatc
ccgaccaacgtgatctcgatcaccgacggccagatcttcctggaaaccgagctgttctac
cagggcatccgccccgccgtgaacaccggtctgtcggtgtcgcgcgtgggctcctcggcc
cagaccaacgcgatgaaatccgtcgctggcccggtgaagctggaactggcgcagtaccgc
gaaatggcggccttcgcgcagttcggctccgacctcgacgccgccacacagcagctgctg
aaccgtggtgcgcgcctgaccgagctgatgaagcagccgcaatactcgccgctgaccaat
gccgagatcgtctgcgtgatcttcgccggcaccaagggctacctcgacaagatccccgtg
ggggacgtgggccgttacgagaagggcctgctggcgcacctgcgcggcaagcacaagggc
ctgctggactacatcaccaaggaagatcccaagatcaagggtgaggccgaagacaagatc
cgcgcagcgctcgacgaattcgccgcgaccttcgcgtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-DSH (1)   
   ROSEOBASE-DSH (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (6)   
   PROSITE (1)   
All databases (21)

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