KEGG   Dinoroseobacter shibae: Dshi_3023
Entry
Dshi_3023         CDS       T00612                                 
Symbol
nth
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Dshi_3023 (nth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsh03400]
    Dshi_3023 (nth)
Enzymes [BR:dsh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Dshi_3023 (nth)
DNA repair and recombination proteins [BR:dsh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Dshi_3023 (nth)
 Prokaryotic type
     Dshi_3023 (nth)
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_8
Other DBs
NCBI-ProteinID: ABV94756
RoseoBase: Dshi_3023
UniProt: A8LKH3
Position
complement(3193311..3193955)
AA seq 214 aa
MAKQLDYHTIREIFTRFQAAEAEPKGELNHVNAYTLVVAVALSAQATDAGVNNATEALFK
IADTPEKMLALGEEGVIQHIKTIGLYRNKAKNVIKLSRILVEQYGGEVPNSRAALESLPG
VGRKTANVVLNMWWGHPSQAVDTHIFRVGNRSGICPGKDVVAVERAIEDHIPVDFQHHAH
HWLILHGRYICKARKPACGACLIRDLCQFEDKTE
NT seq 645 nt   +upstreamnt  +downstreamnt
atggccaagcaactcgattatcatacgatccgcgagatcttcacccggttccaggccgcc
gaggccgagcccaagggcgagttgaaccatgtcaacgcctacaccctggttgtggccgta
gcgctttcggcacaggccacggatgcgggcgtgaacaatgccaccgaggccctgttcaag
atcgccgatacgcccgagaagatgctggccttgggcgaagagggcgtgatccagcatatc
aagaccatcgggctgtatcgcaacaaggccaagaacgtcatcaagctcagccgcattctg
gtcgagcagtatggcggtgaggtgccgaattcccgcgcggcactcgagagcctgccgggg
gtgggccgcaagaccgccaatgtggtgctcaacatgtggtgggggcatccgagccaggcc
gtggacacccacatcttccgcgtcggcaaccgcagcggcatctgcccgggcaaggacgtg
gtcgcggtcgaacgcgccatcgaagaccacatccccgtcgatttccagcaccacgcccat
cactggctgatcctgcatggccgctacatctgcaaggcgcgcaaaccggcctgcggggcc
tgcctgatccgcgatctctgccaattcgaggacaagaccgaatga

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