KEGG   Dinoroseobacter shibae: Dshi_3369Help
Entry
Dshi_3369         CDS       T00612                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dsh  Dinoroseobacter shibae
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dsh00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Dshi_3369 (mutM)
Enzymes [BR:dsh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Dshi_3369 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Dshi_3369 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
RoseoBase: 
UniProt: 
Position
3541951..3542805
Genome map
AA seq 284 aa AA seqDB search
MPELPEVETVRRGLEPVMTGQRIIEADIRRPDLRWPLPANMQTRLEGKRILRLARRSKYI
LAELDSGETLIIHLGMSGRILIHGGQAPGAFHHALPSLEKHDHVVLDFDTGARVVFNDAR
RFGAMDLCETTEIDQHPMLATLGPEPLGNAFHEAYLTTRLKGRMTPIKSALLDQKVVAGL
GNIYVCEALFQAGISPLRKAGRVSETRIASLVPIIRTVLGDAIEAGGSSLRDYRQTDGDL
GYFQHRFRVYDRENAPCVTAGCPDVVRRVVQSGRSSFYCPSCQR
NT seq 855 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaacttccagaggtcgaaaccgtgcgccgcgggctggaacccgtgatgaccggg
cagcggatcatcgaagccgatattcgccgcccggacttgcgttggcctctccccgcgaac
atgcagacacgtctcgaaggcaagcggattctgcggctggcgcgacgatcgaagtatatt
ctggccgagctcgacagtggcgagaccctcatcatccatcttggcatgtcggggcggatc
ctgatccatggcgggcaggctccgggagcatttcatcacgctttgccctcgctggaaaaa
cacgatcacgtagtgctggatttcgacacgggcgcacgggtggtcttcaacgacgcgcgc
cgcttcggagccatggacttgtgcgaaaccaccgagatcgaccaacacccgatgctggca
acacttggccccgagcccttgggaaacgcgttccacgaagcctacctgaccacgcgactg
aagggtcggatgacaccgatcaagtccgcgcttctcgaccagaaggtcgtcgcaggcctc
ggcaacatctatgtgtgcgaagcgttgttccaagccggtatctcgcccctgagaaaggcg
ggacgggtttcggaaacccgcatcgcatctctcgtgccgatcatccgcacggttctgggc
gacgcgatcgaggcagggggatcctctttacgcgattaccggcaaacggacggtgatctg
ggctattttcagcaccggttccgggtttacgaccgtgaaaacgccccctgcgtcacggcg
ggttgcccagatgttgtgcgccgcgtggtgcagtctggcagatcgtcgttctactgtccg
agctgccaaagatag

DBGET integrated database retrieval system