KEGG T01065: Dsim

Drosophila simulans: Dsim_GD13291

Entry

Dsim_GD13291 CDS T01065

Definition

GD13291 gene product from transcript GD13291-RA

Orthology

K10755

replication factor C subunit 2/4

Organism

dsi Drosophila simulans

Pathway

dsi03030	DNA replication
dsi03420	Nucleotide excision repair
dsi03430	Mismatch repair

Module

dsi_M00289

RF-C complex

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:dsi03030]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dsi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:dsi03430]

SSDB

Motif

Pfam:

Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_16 AAA_22 Rad17 Mg_chelatase AAA_18 Viral_helicase1 AAA_10 ArgK RuvB_N AAA_17 AAA_5 MobB AAA_19 ABC_tran RNA_helicase DEAD AAA_29 SNF2_N AAA_3 NTPase_1 IstB_IS21 AAA_24 AAA_11 AAA_28 AAA_23 FtsK_SpoIIIE SRP54 DUF815 AAA_25 AAA_2 DUF258 KTI12 AAA_30 T2SE SecA_DEAD Arch_ATPase NACHT

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

Position

AA seq 331 aa
MPEEPEKTADDKRSHLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGV
GKTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVIL
DEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLA
KLIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQSTAQGFGDITAENVFKVCDEPHP
KLLEEMIHHCAANDIHKAYKILAKLWKLGYSPEDIIANIFRVCKRINIDEHLKLDFIREI
GMTHMKIIDGINSLLQLTALLAKLCIVAEKH

NT seq 996 nt +upstreamnt +downstreamnt
atgccggaagaaccagagaaaacggcggacgacaagcgcagtcacttgccctggattgag
aagtaccgccccgtgaagttcaaggagatagtgggtaatgaggataccgtagcaagatta
tcagtattcgccacccagggaaatgcacccaatattattattgctggtcctccaggcgtg
ggcaagacaaccaccatccagtgtcttgctaggattcttctgggagacagctacaaggag
gctgtcctcgagctgaatgcctccaatgaacgaggaatcgatgtggtccgcaacaagatc
aagatgtttgctcagcaaaaggtgacattgccgcggggcaggcacaagattgtgattctg
gacgaggcagacagcatgacggagggtgcccagcaggcactgcgccggaccatggagatc
tacagcagcaccactcgttttgccctggcctgcaacaccagcgagaagatcatagagcct
atccagtcccgctgcgccatgctacgattcaccaagctgtccgatgcgcaagttctggcc
aagctcatcgaggtggccaagtgggagaagctcaactacacagaggacggactggaggcc
atcgtgttcactgcccaaggtgacatgcgacagggactgaacaacctgcagtccaccgcc
cagggatttggcgacatcacagctgagaacgtctttaaggtctgcgacgagccccacccg
aagctcctggaggagatgatccaccattgcgctgccaacgacatacacaaggcgtacaaa
atcctggccaagttgtggaagctgggatactcgccggaagacatcattgcgaacatattc
cgggtctgcaagcgcatcaacatcgatgagcatctaaagctggactttatccgtgagatt
ggcatgacccacatgaagattatcgacggtatcaactcgctgctgcagctcaccgccctc
ctggccaaactctgcattgtcgcagagaagcattag

All links

Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (41)   
   Pfam (41)   
All databases (55)   

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