KEGG   Drosophila simulans: Dsimw501_GD18846
Entry
Dsimw501_GD18846  CDS       T01065                                 
Symbol
Dsim_GD18846
Name
(GenBank) uncharacterized protein
  KO
K12607  CCR4-NOT transcription complex subunit 10
Organism
dsi  Drosophila simulans
Pathway
dsi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dsimw501_GD18846 (Dsim_GD18846)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD18846 (Dsim_GD18846)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     Dsimw501_GD18846 (Dsim_GD18846)
SSDB
Motif
Pfam: TPR_2 TPR_4 Paf67
Other DBs
NCBI-ProteinID: KMZ03959
FlyBase: FBgn0190359
Position
3R
AA seq 632 aa
MVIAVPAVENATCLELLLCQAHEQFNNSEFDRCLELLQELETRGESSGPVLRHNRAVVSY
YKTGCTQHSVLLKELEALTADADAPGEVSSGLSLKQGAAAASVARYNRAVIYYHRHMFGT
ALERLAPLVARLEALEKAMAALVATLQLQLLLATNQLNRAEAFLDYLQYKLNLVATAPSS
NAAEEAAVVGTAPPTAATNSSVVATPGGAAMEGAVPGLGGSLQLLQLITLVLNRKPVVIQ
EDGTPEYAALKAQQYYIMKDFQMAAKQLMRINNECTQAGTVTPQLSTCIANNMGVIHLRV
RHYAIAAKFFQNALNFDQQLARNLRQSTLQTMSSARSCEILYNLGVAMLHLRRPKEAFQC
FLVPVKQFHSNPRLWLRMAEACIMEHEAKLVEEERQSQSETPSTKPYAPQSAGVPEPTLE
FAALCLRSALTLTQHYKTRFHMAAVSSEDVEAPEPKDPTQESWRHPQDNNFCNPSKPVSL
ESLENMMAAIYAAHSFVSLRLGDHVTALEMSEKLLACERLSDAHKLLGHMYAGEALMLMD
KAAEARDHLDPTFVGTLNAFDFETRDWQLKSVDAAQNVVRYNLAVAMALQNDLPQAKALL
ANLTHSLVANKALALRRFMDLKTGPVPGGTPS
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggtcatagctgttcctgcagtggaaaacgctacctgcctcgagcttctgctgtgccag
gcgcacgagcagttcaacaactcggagttcgatcgctgcctggaactgctccaagagttg
gagacacgcggcgaaagcagtggtcctgtcctgcggcacaaccgggcggtagtcagctac
tacaaaaccgggtgcacccaacactccgtcctgctgaaagaactggaggccctaaccgcc
gatgcagatgcgcccggagaggtgtccagcgggctgagccttaagcagggagcggccgcc
gccagtgttgctcgttacaaccgggcggtcatctattatcaccgacatatgttcggcacg
gcactggagagactagcaccactagtggctcgtctggaggccctggagaaggcaatggca
gcgctggtggccacactacagctacagctgctgttggccaccaatcaactaaaccgagcc
gaggcctttctggattacttgcagtacaagcttaacctggtggccacagcgcctagcagc
aatgcggccgaagaggcagctgttgttggcacagcacctccgacggcggccaccaacagt
tcagtggtggccacaccaggaggagcagctatggagggagctgtgcccggtctgggcgga
agtctgcagctcttgcagctaattacgctcgtgctcaaccgaaaaccggtggttattcag
gaagacggcacgccggagtacgctgctctgaaagctcagcagtactacataatgaaggat
tttcagatggccgccaagcagctgatgcgaatcaataacgagtgtacacaagcgggcact
gtaacaccgcagctgagcacgtgcattgccaacaatatgggagtgatacacttaagagtg
cgccactatgccatcgccgccaagttcttccaaaatgcgctcaactttgaccagcagctg
gcgcgaaatttgcgccagagtacgctgcaaaccatgagttcggcacggtcctgcgagatc
ctttacaacctcggcgtggctatgttgcacctacgccgccccaaggaggcgtttcagtgc
tttctggttcccgttaagcaattccacagcaatccacgtctttggctgcgcatggctgag
gcctgcatcatggagcacgaggcgaaacttgtggaggaggagcgccaatcgcagtcagaa
acgccatcaacaaagccatatgctcctcaatcggcgggagtgccagagcccacgctggaa
ttcgctgccttgtgtctacgtagcgcgctgacgctaacgcagcactacaagacgaggttc
cacatggcggcggtctcctcggaggatgtggaagcacccgaacccaaggatccaactcag
gagagttggcgtcatccccaggacaataacttctgcaatccctcgaagccggtcagccta
gagtcattggaaaacatgatggctgccatatatgctgctcacagcttcgtctcgctgcgc
ctaggcgaccatgtgaccgctcttgagatgtcggaaaaactgctggcctgtgaacgcctg
tccgatgcgcacaaattgcttggtcacatgtacgctggcgaggcgttgatgcttatggac
aaggcagccgaggcacgcgaccatttggaccctacttttgtgggcacactgaacgccttc
gattttgagacacgtgactggcaactgaagtcggtggacgccgctcagaacgttgtgcgg
tataatctggccgttgcgatggctctacagaacgacctgcctcaagctaaagcactcctg
gccaatttaacccattcgctggtggccaacaaggcgcttgctttgcgacgcttcatggac
ctcaagacgggtcccgttcctggcgggacgccgagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   FLYBASE (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system