KEGG   Drosophila simulans: Dsimw501_GD11973
Entry
Dsimw501_GD11973  CDS       T01065                                 
Symbol
Dsim_GD11973
Name
(GenBank) uncharacterized protein
  KO
K11600  exosome complex component RRP41
Organism
dsi  Drosophila simulans
Pathway
dsi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dsimw501_GD11973 (Dsim_GD11973)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsi03019]
    Dsimw501_GD11973 (Dsim_GD11973)
Messenger RNA biogenesis [BR:dsi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Dsimw501_GD11973 (Dsim_GD11973)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     Dsimw501_GD11973 (Dsim_GD11973)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: KMY90046
FlyBase: FBgn0183712
UniProt: A0A0J9R1Q5
Position
2L
AA seq 246 aa
MAGKYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK
GNQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKMYLQQALSAAIKSELYPRSQIDIY
VEVLQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFEEVSGGP
KLTVAALPTAEKIAFLEMSERFHIDHLETVIETAMAGCREIRDILEAAVKEHLLHMGSAS
DFAKVG
NT seq 741 nt   +upstreamnt  +downstreamnt
atggctggtaaatacgatctgctcagcgagcagggcctccgtctggacggacgacgtcct
catgaactgcgtcgcatcaagtgcaaactgggagtcttcgagcagcccgatggaagtgcc
tacatggagcagggaaacaccaaggttctggctgccgtctatggaccccaccaggccaag
ggcaatcagacggagtccgtcatcaactgtcagtacagtcaggccaccttctccacggcg
gagcgcaagaataggccgcgcggcgatcgcaaatctctggagttcaagatgtatctgcag
caggcgctaagtgctgccattaaatctgaactatatccccgctcccagatagacatatac
gtggaggtgctccaagacgacggcgccaactatgcggtggcccttaatgccgccacactg
gcgctaattgatgcgggtatctgcctcaacgagttcattgtcgcctgcaccgcctcactg
agcaaatcgaacatcccgctcacagacatctcccagttcgaggaggtatccggcggcccg
aagctgaccgtggctgccttgcccaccgccgagaagatcgcctttcttgagatgagcgag
cggttccacatcgatcacttggaaactgtcatcgagactgctatggcgggttgccgcgag
ataagggacattctggaggcagcagtcaaggagcaccttctgcacatgggcagtgcctct
gactttgcgaaagttggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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