KEGG   Dickeya solani IPO 2222: A4U42_16805
Entry
A4U42_16805       CDS       T04410                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
dso  Dickeya solani IPO 2222
Pathway
dso00300  Lysine biosynthesis
dso00470  D-Amino acid metabolism
dso01100  Metabolic pathways
dso01110  Biosynthesis of secondary metabolites
dso01120  Microbial metabolism in diverse environments
dso01230  Biosynthesis of amino acids
Module
dso_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dso00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    A4U42_16805
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    A4U42_16805
Enzymes [BR:dso01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     A4U42_16805
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1583
Other DBs
NCBI-ProteinID: ANE76847
Position
3915586..3916857
AA seq 423 aa
MAKLPQHVHDVIVRLQQQHTDPLAAFVYDLTALRQHVGEVMAALPPGVELYYAIKANSEK
PILDALAPLVHGFEISSGGEIARVAGCDTRKPFVFSGPGKLDSDFDLALEQGVEAVHVES
RHEIARLQQRAKQHGVVQPVFIRINPELASSLTSKLAMAGTPTPFGMDEADLADAVREVD
NASHLQLKGFHVHAMSHQMVVARHQQLLDLYLTRWPQWRALSAHPQHITHLNVGGGIGVP
YLTPERFDWPALCDYLRTRLAQQPDAPIVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFL
VCRGGTHQFRLPVAQGHDHPVIHLPLASAPTTGETRDWTVVGQLCTPKDVLSRDQRLTDV
NIGDLLVLPLAGAYGYNISHADFLCHPRPGQYFITDEGLITDALFTTDDGMTADVAGAVS
RVE
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggctaagctgcctcagcacgttcacgatgtgattgtccgcctgcaacagcagcatacc
gacccgctggcggcgtttgtgtacgacctgacggcgctgcgccagcacgtcggcgaggtg
atggcggcgctgccgccgggcgtcgaactctattacgccatcaaagccaacagtgaaaaa
ccgattctggacgcgctcgcgccgttggtgcacggttttgaaatctcgtcgggcggtgaa
atcgcgcgcgtggccggttgcgacacacgcaaacccttcgtgttctccgggccgggaaag
ctggactctgacttcgacctggcgctggaacagggcgtggaagcggtacatgttgagagt
cgccacgagattgcgcgcctgcaacagcgggcgaagcagcacggcgtggtccagccggtg
ttcatccgcatcaatccggaactggcgtcgtcgctgaccagcaagctggcgatggccgga
acgccgacgccgttcggcatggatgaagccgacctggcggatgcggtgcgggaggtggat
aacgccagccatctgcaactgaaaggatttcatgtccacgccatgtcgcaccagatggtg
gtggcgcggcaccagcaactgctggatctctacctgacgcgctggccgcagtggagagcg
ctgtccgcgcatccgcagcatatcacccacctgaacgtgggcggcggcatcggcgtgccg
tacctgacgccggagcgtttcgactggccggcgctgtgcgattacctgcgcacgcggctg
gcgcaacagccggacgcgccgattgtccgttttgaaccggggcgtttcatcagcgcctac
tgcggttattacgccatcgaggtgctggataaaaagcgcagccacggcaaacattttctg
gtttgtcgcggcggcacccatcagttccgcctgccggtagcgcaggggcacgatcatccg
gtgatccacctgccgctggcgtcggcgccgacaaccggcgagacgcgcgactggacggtg
gtcggccagctgtgcacgccgaaagatgtgctcagccgcgaccagcgcctgaccgacgtc
aatatcggtgatctgctggtattgccgctggcgggcgcctacggctacaacatttctcat
gccgacttcctgtgtcatccgcgtcccggtcagtatttcatcactgatgagggtcttatt
actgacgcgcttttcactactgacgacggcatgacggcggatgtggccggagcggtgagc
cgtgtggaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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