KEGG   Dichomitus squalens: DICSQDRAFT_143747
Entry
DICSQDRAFT_143747 CDS       T03133                                 
Name
(RefSeq) rhamnogalacturonase
  KO
K18580  rhamnogalacturonan hydrolase [EC:3.2.1.171]
Organism
dsq  Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    DICSQDRAFT_143747
Enzymes [BR:dsq01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.171  rhamnogalacturonan hydrolase
     DICSQDRAFT_143747
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 18836368
NCBI-ProteinID: XP_007361679
JGI: 143747
Position
Unknown
AA seq 440 aa
MGFKSLFAAVALVTAVSAQLSGSVGPTTPLSQKSHICNVLDYGGSVGSSDIGPAITSAFN
NCVLKNSGSTLYVPAGNYNMATWVDLKGGTKWAFRLDGFITRTSTTGGNMIAIETANDFE
FYSANSAGGIQGYGYQCRNAGPRLIRIVNSQNWSIHDLVLVDSPEFHLVIQSGQNGEIYN
LAIRGANIGGSDGVDVWGTNYWIHDVEVTNRDECVTVKSPANNILIERIWCNQSGGSAIG
SLSDGTAIEDVIYRNIYTNGGNQAFMIKSNLGSGYVRNVQFQNFISRGTAYGLDINQYWS
SQSPGTGAGVELSNITFSNWDGNVVDGVARPPIQLICADGAPCHGITLSNVNMWSQTNKA
VVKCESAYGSGLSCIKGGSSYTSYAIVTQSATQPPGYSTPTTLAGDLSSGFATNAAIPTP
TIPTTFYPGLPQISPLAKNQ
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgggcttcaagtctctctttgctgccgttgcgctcgtcactgccgtctctgcccagctc
tcgggtagcgttggtcctacgactcctctctcgcagaagagccacatttgcaatgtcctc
gactacggcgggagcgtcggctcgagcgacattggtcctgccatcaccagcgcgttcaac
aactgtgtcctgaaaaactccgggtcgaccctgtatgtccccgccggcaactacaacatg
gccacttgggttgacctcaaggggggtaccaagtgggcattccgcctcgatggtttcatc
acccggacatcgaccactggcggcaatatgatcgcgatcgagactgccaatgacttcgag
ttctactccgccaatagcgctggaggcattcaaggttacggttaccagtgtcgcaatgcg
ggcccacgtctgatccgcatcgtcaactcccagaactggtccatccacgacctcgtcctc
gtcgattcgcctgagttccacctggtcatccagtctggacagaacggagagatctacaac
ttggcaattcggggtgccaacatcggtggttccgatggtgtggacgtgtggggaaccaac
tactggattcatgacgtcgaggtcaccaaccgcgacgagtgcgttactgtcaagtccccc
gcgaacaacattctgattgagcgcatttggtgcaaccaatcgggcgggagcgccatcggc
agtctatcagatggcaccgcgatcgaggacgtgatctacaggaacatctacactaatggc
ggcaaccaggcgttcatgatcaagagcaaccttggctctggttacgtgaggaacgtgcag
ttccaaaacttcatctcgaggggcaccgcgtacggcctcgatatcaaccaatactggtcg
tcgcaatcccctggcacaggggcaggtgttgagctctcgaacataaccttctcaaactgg
gatggtaatgtcgtagatggcgttgcgcgaccccctatccagctcatttgcgcggacggt
gccccttgccacggtatcactctaagcaacgtgaacatgtggtcgcagaccaacaaggcc
gtcgtgaaatgcgagagcgcatacggcagcggtctctcatgcatcaagggcggctcatcg
tacacgtcctatgcgattgtgacgcagtccgcgactcagccgccgggctactcgaccccg
acgacactggctggagatctctcttctggcttcgccacgaacgctgctattccgacaccg
acaattccgactacattttaccctggtcttccccagataagtccgcttgcgaagaaccaa
tga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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