KEGG   Dichomitus squalens: DICSQDRAFT_155881
Entry
DICSQDRAFT_155881 CDS       T03133                                 
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
dsq  Dichomitus squalens
Pathway
dsq03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DICSQDRAFT_155881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsq03021]
    DICSQDRAFT_155881
Enzymes [BR:dsq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DICSQDRAFT_155881
Transcription machinery [BR:dsq03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     DICSQDRAFT_155881
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 18837537
NCBI-ProteinID: XP_007367074
JGI: 155881
UniProt: R7SWL9
Position
Unknown
AA seq 1142 aa
MAVYGEEEDWGRVAQTHWRGLGLTDPIKSVEDKWLLLPAFLKVKGLVKQHIDSFNYFVDV
DIKNILKANNKVTSDVDPRFWLKYTDIVVGFPDRTDADAIDKSVTPHECRLRDTTYSAPI
LVTIQYTRGKTVVRRANVNIGRLPIMLRSNKCVLTGRNEAQLARMTECPLDPGGYFIVKG
TEKVILVQEQLSKNRIIVEIDPTKGVVQASCTSSTHGGLKSKTYVATKKGKIYLRHNSIH
EDVPIAIALKALGIQSDKEILLLTAGNHEAYKSAFSPNLEEAAKLGVFTRHQALEWIGSR
VKVNRRVVGPRRPSWEEALEALATIVLAHVPVHGLDFRPKAVFVATMTRRVLMAMDDEKM
VDDRDYVGNKRLELAGQLLALLFEDLFKTFNANLKAAIDKVLKKPSRTSEFDAFNTMQFQ
GDHITAGFVRAISTGNWSLKRFKMDRAGVTHVLSRLSFISALGMMTRISSQFEKTRKVSG
PRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIIRIAFMLGVEDISLAT
GAEIYGPHTFVVNVNGSIIGLTRYPARFVSNFRRLRRAGRFSEFVSVYINHHHRTVLIAS
DGGRICRPMIIVENGRPKVTSEHIAQLKQGQLTFDDFLRKGLVEYLDVNEENDSYIALYE
KDIVPGTTHLEIEPFTLLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIGYNQLNRIDT
LLYLSVYPQQPMVKTKTIELIGYDRLPAGQNATVAVMSYSGYDIEDALILNKASLDRGYG
RCQVLRKNATLIRKYPNGTFDRLADAPLDENGQVQKKYDIVQTDGLAGVGERVDPGDVYI
NKQTPTNANDNSFTGQAATVPYKNTPMTYKSPVAGQIDKVMVTDTENDQTLIKVLIRQTR
RPELGDKFSSRHGQKGVCGLIVNQEDMPFNDQGIVPDTIMNPHGFPSRMTVGKMIELLAG
KAGVLAGKLQYGTAFGGSKVEDMSRILVENGFSYAGKDMLTSGITGEPLEAYVYFGPIYY
QKLKHMVMDKMHARARGPRATLTRQPTEGRSREGGLRLGEMERDCLIGYGATQLLLERLM
ISSDQFQVDACEECGLLGYNGWCPYCKSSKKMAQLTIPYAAKLLFQELMAMNVVPRLVLD
DA
NT seq 3429 nt   +upstreamnt  +downstreamnt
atggctgtatatggggaggaagaagattgggggagggttgcgcaaacgcactggagaggc
cttgggctcacggacccaatcaaaagtgtagaggacaaatggcttttgcttccggccttc
ctcaaggtcaaaggactagtaaagcaacatatcgactccttcaactactttgtcgatgtg
gacatcaagaacatattgaaggcgaataacaaggtcacgtcggacgtcgatccccgcttc
tggctgaagtacacggacatcgtggtcggcttccccgacaggacggacgcggacgcgatt
gacaagagcgtcacccctcatgaatgccgactccgcgatactacatacagcgcaccaatc
ttagtgaccatccaatacacgagaggaaagactgtggttcgtcgagcgaacgtgaacatt
ggtcgactgcctatcatgctccgaagcaacaagtgcgtgctcacaggccgcaatgaagca
cagcttgctcgcatgacggagtgtccgctggatcccggaggatacttcatcgtcaaagga
acggagaaggtcatcctcgttcaagagcaactgagcaaaaaccgtattatcgtcgagatt
gacccaacgaagggggttgtacaggcttcatgtacatcatcaacgcatggtggtctgaag
tcaaaaacttacgttgccacaaagaagggcaagatctacctccgccacaactctattcac
gaggacgttccgattgctatcgctctcaaggccctaggcatccagtcggacaaagaaatt
ttactcctcaccgcagggaaccacgaggcgtacaagtctgccttctcgccaaatctcgag
gaagcggcgaaacttggagttttcactcgtcaccaggctctcgagtggataggctctcgg
gtgaaggtcaaccggagggtagtgggtccgaggcgtccctcgtgggaggaggcactggag
gcgctcgcaacgatcgtccttgctcatgtgccagtccatggtctcgacttccgccctaag
gccgtctttgtggcgacgatgacccgtcgcgtcctaatggccatggacgacgaaaagatg
gtggatgaccgagattacgtcggaaacaaacggctcgaactggcggggcagcttctagcg
cttctcttcgaggacctctttaagacgttcaatgccaacttgaaggctgcgatcgacaaa
gtcttgaagaagccgtcacggacgagcgaatttgatgcgttcaacacgatgcagtttcaa
ggggatcacatcactgcgggctttgtgcgcgcgatatccacggggaactggtctctcaaa
cggttcaagatggaccgggcgggcgtgacacacgtcctcagcaggctgtcgttcatctcg
gctctcgggatgatgacccggatatcttcccagtttgagaagacacgcaaggtcagtggc
ccccgagcgctgcaacccagccaatggggcatgttatgtccgagcgacacgccagaagga
gaggcatgtgggctggtcaagaacctcgcgttgatgacgcacatcaccacggacgtggag
gaggagccgatcatcaggatagcgttcatgctgggcgttgaagacatcagtttagcgacc
ggcgcagaaatctatggcccacacacatttgtagtcaatgtgaacggcagcatcatcggc
ctaacacggtatcccgcgcgcttcgtcagtaatttccgaagactacggcgagcaggaaga
ttcagcgaattcgtcagcgtgtacatcaaccatcaccatcggaccgtactcattgcgagc
gacggtggccgtatatgtcgacccatgatcatagtagagaatgggaggccgaaggtcacg
tctgagcatatcgcccaactcaagcaaggccagctgacattcgacgacttccttcggaag
ggtctcgtggaatacctggacgtcaacgaggagaacgactcttacatcgcgctatacgaa
aaagacatcgttcctgggacgacacacttggagatcgaacccttcacgttgctcggagcc
gtcgccggactgattccgtacccacaccacaatcagtcaccccgaaacacgtaccaatgc
gctatgggcaagcaagccattggcgccatcggctacaatcaactcaaccgcatcgacaca
ctgctatatctgtcagtctatccacagcagccgatggtgaagaccaagaccattgagctc
attggctacgaccgcttgccggccgggcagaacgctaccgtggcggtcatgagttactcc
ggatatgatatcgaggatgcgctcatcttgaataaggctagcctcgaccgtggctacggt
cgatgtcaagtcttacgcaagaacgccacccttatccgcaagtaccccaacggaacgttc
gaccgcctcgccgatgcgcccttggacgagaacggccaggtgcagaaaaagtacgacatc
gtccagacggacggtctcgcaggcgttggcgagcgtgtcgatcctggggacgtgtatatc
aacaagcagacaccaacaaatgccaacgacaactcgttcaccggtcaggcagcgacggtc
ccgtataagaacacgcccatgacttacaagtcacctgttgcgggtcagattgataaggtc
atggtcactgacaccgagaacgatcagacgctcatcaaggtgctgatacggcaaacgcga
cggccagagcttggcgacaagttttcgtcgaggcacgggcagaagggcgtatgtggcctg
attgtcaaccaggaggacatgccgttcaacgaccaaggcatcgttcctgacacaatcatg
aacccgcacggttttccgtcccgcatgacggtagggaagatgattgagcttctggctggc
aaggctggtgtgttggcaggcaagttgcagtacggtaccgcgttcggtggctccaaggtc
gaagatatgtcgcgcattttagtggagaacggattcagctatgctggaaaggacatgctc
actagcggcatcaccggcgagcccctagaagcttacgtttactttggacccatttattat
caaaaactgaaacacatggtcatggataagatgcatgctagggcgaggggcccgcgcgca
acgctgacaagacagccgacagaaggtcgatcgcgtgaaggtggtctccgacttggggag
atggagcgcgattgtcttatcggctacggcgcgacgcagctgctcctggaacggctcatg
atatcgtctgaccagttccaggtggacgcgtgtgaggagtgcggcttgcttgggtacaat
gggtggtgcccgtactgcaagtcatcgaagaagatggcgcaattgacgattccatatgct
gcaaagctgctcttccaggagctcatggcgatgaacgttgtcccgcggttagtgctggat
gacgcatga

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