KEGG   Dichomitus squalens: DICSQDRAFT_179268
Entry
DICSQDRAFT_179268 CDS       T03133                                 
Name
(RefSeq) TAF-domain-containing protein
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
dsq  Dichomitus squalens
Pathway
dsq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    DICSQDRAFT_179268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsq03021]
    DICSQDRAFT_179268
   03036 Chromosome and associated proteins [BR:dsq03036]
    DICSQDRAFT_179268
Transcription machinery [BR:dsq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     DICSQDRAFT_179268
   Coactivators
    SAGA/TFTC/STAGA complex
     DICSQDRAFT_179268
Chromosome and associated proteins [BR:dsq03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     DICSQDRAFT_179268
    STAGA complex
     DICSQDRAFT_179268
    TFTC complex
     DICSQDRAFT_179268
    SAGA complex
     DICSQDRAFT_179268
    SLIK complex
     DICSQDRAFT_179268
SSDB
Motif
Pfam: TAF6_C TAF Histone CBFD_NFYB_HMF Bromo_TP TFIID-31kDa
Other DBs
NCBI-GeneID: 18840733
NCBI-ProteinID: XP_007363817
JGI: 179268
Position
Unknown
AA seq 481 aa
MNKQAPKARPAPAKVPGIYKVDSVRDVAESLNLPNLPDAVASALASDVEYRIQQVVEEAA
RFMRHAKRTTLTTADIDQALRVLNIEPLYGHFPHNPPAFRRALPFPQMQTAGSVYFVEDE
EIEFDRVIREEKISMPKGVSWTAHWLAVEGVQPLIPENPPAAPREIDPDSAAAKTGTANG
VSGSVFPLTPPSSDRPSPIQSSKQTQQQNILVKQTLSRELQLYYTRLTSSLLPPTSDPAK
RTAALASLRHDAGLSPLLSYLVHWVGEGVVNTLRGGSQTETDGKLLEVYLDVIAALLDNQ
TLGVEPYLHQILPSVFSILLYSSLPPSNAIHLRTTAAQILAHLLTHYSMTYPGLPTKIVK
TLIVGLIDNKKSRATHEGAIRGLMAIGKEALRQGLVNRSGARTVGEKCMPGESSQLVELV
MDGLKLIHPPSAHPVPLDPNSSADSELIEKLHATLGDFFAERVVSDAEWARGILSDEASV
L
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgaacaaacaagcaccgaaggcgcgacctgcaccagccaaagtacccggcatatacaaa
gtcgactcagtccgcgatgtagcggagtcactgaatttaccaaacctaccagatgctgtg
gcctccgcgcttgcgagcgacgtcgagtatcgaatacaacaggtagtcgaggaagccgcg
cgatttatgcgacacgcgaagcgcaccaccctcacgacagccgacattgatcaagctcta
cgcgtcctaaacatcgagcctctctacggccacttcccgcacaaccctccagcgttccgc
cgggccctcccttttccccaaatgcagaccgcgggctcggtgtactttgtcgaagacgaa
gagatcgagtttgaccgcgtcatacgcgaagagaagatctccatgcccaaaggcgtcagc
tggacagcgcactggctcgcagtggagggcgtccagcccctcatccctgagaacccgcct
gccgcccctagagagattgaccctgacagcgcagcagcgaagaccggtacagcgaatggt
gtctccgggtcagtgtttcctctcacaccaccatcctccgaccgcccctcgccaatccag
tcgagcaagcagacacagcaacaaaatatcctcgtcaagcagacactttcgcgagagttg
cagttgtactacacgcgtctcacctcgtcgctgcttccccccacctccgatcctgcaaag
cgaactgccgcacttgcaagtctgcggcacgacgcgggtttgtcgccactcttgtcgtat
ctcgtgcattgggtcggagagggtgtggtcaatacacttaggggtggctcgcagacggaa
acggatgggaagttgttggaggtctacctggacgtcatcgccgcgcttctagacaaccag
acacttggtgtggaaccatatctccatcaaatactgccctccgttttctccatcctgcta
tactcttccctaccaccatccaacgccatccacctccgcaccacagcagcccagatcctt
gctcacctcctcactcactattccatgacataccccggcctcccgaccaaaattgtgaag
acattgatagtaggcctcattgataacaagaaatcgcgagcgacgcacgagggcgctatc
cgcgggctaatggccatcgggaaggaggccctacggcaagggctcgtgaaccgcagtggc
gccagaactgtgggcgagaagtgtatgcccggcgagtcgagtcagctcgtcgagctcgtc
atggacgggttgaagttgatccacccaccgtctgcccatcccgtccccctcgacccgaat
tcgagcgcggacagcgagctcattgagaagctccacgcgacactaggcgacttcttcgcg
gagcgcgtcgtgtccgatgccgagtgggcgcggggcattctttcggacgaggcttccgtt
ctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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