KEGG   Dichomitus squalens: DICSQDRAFT_55659
Entry
DICSQDRAFT_55659  CDS       T03133                                 
Name
(RefSeq) POP1-domain-containing protein
  KO
K01164  ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
Organism
dsq  Dichomitus squalens
Pathway
dsq03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:dsq00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    DICSQDRAFT_55659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dsq03009]
    DICSQDRAFT_55659
   03016 Transfer RNA biogenesis [BR:dsq03016]
    DICSQDRAFT_55659
   03029 Mitochondrial biogenesis [BR:dsq03029]
    DICSQDRAFT_55659
Enzymes [BR:dsq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     DICSQDRAFT_55659
Ribosome biogenesis [BR:dsq03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     DICSQDRAFT_55659
Transfer RNA biogenesis [BR:dsq03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    DICSQDRAFT_55659
Mitochondrial biogenesis [BR:dsq03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    DICSQDRAFT_55659
SSDB
Motif
Pfam: POP1_N POPLD GCV_T GCV_T_C
Other DBs
NCBI-GeneID: 18842626
NCBI-ProteinID: XP_007363713
JGI: 55659
Position
Unknown
AA seq 788 aa
MKGLPGAIDVEKFAESRAFEINAMHEAMHNARSNSTARAWQQLPRHLRRRAASHDVRRVP
LRLRDKARAEMDPARRKALGRNNPKQGKLKKVRRTVALLRRQKDKTWLETHIWHAKRMHM
DNMWGYRLAITPTEKSFRPSHRASVHGSILHDASYFATIELKGPEDIIREALANCCDCQG
PSAGAKRFLTGARATETYIYEYNKYPYGLIGPATIMWHADAPGPNGPQAPAIIRGTNAKG
KGDGKEKEVPWVDPERRIRIVWIRVHPSMTEEVHEALRVSTAFALDAAKQTGRTAEVEIA
DLREHFNVFEIMGPKASQVIKGALKPVDDKRDEFKRFWTSLNRIQSAGAVPRGMVIGFTV
HDPRLSFPPKNVKLNIESGPSLSPASTVFPSACLAQSQIWDEDVRMVLRKPRYKKKDLDQ
RRSNNLVPGTPLKSERNDDRVPVLLIQRSVENAALSQIQNFPRLSSTTSLHGWTLIVPQG
WGMPFLSSLIYTGTRVGGQRERQTQAFEAGCTYFPRDFPTTEAYDVYAEDKEDEEREAWE
RKPPAKRPNYEKLGTRSPWRPDWGVVLGIEEPAKSHPEAEELLDTQRDPMVADEAAATEG
NRKVDIWLLRGPDIPQLVAEVSSMLNPAAGLLSQVNQARAKRKLDPLPVNLHADDLIKGA
LVQVSITLCGRGFPDDLAIIYRVGDDEAKEWMRAEVNKKNGLSLLQDGPDETELSQVPPP
SEGIIGYVTTGNFSLSLGEGHAVGAIPLSQYLDLRKQAQRLRNDTKLLVKLRNRHETRCR
AALVELLH
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgaaggggctcccaggtgcgatagacgtggagaaatttgcagagtcccgggcattcgaa
atcaacgccatgcacgaagccatgcataacgctaggtcaaattctactgcgcgcgcttgg
cagcagctccctagacatctgcgtcgccgagccgcaagccatgatgtccgacgagttccc
ctgaggttgcgagacaaggctcgtgccgaaatggatcctgcccgtcgcaaagcactaggc
cgcaataatcccaaacaaggaaaactcaagaaggtgcggcgcactgtagccctcctccgt
cgacaaaaggataagacgtggttggagacgcatatatggcatgcgaagaggatgcacatg
gacaacatgtgggggtacagactggccatcacgcctacggagaagtcattcaggccgtca
catagggcatctgtgcatgggtctatcctacacgatgcttcttacttcgctaccattgag
ctcaagggtcctgaggacatcatccgtgaggctcttgccaactgctgcgactgtcaagga
cccagcgccggtgcaaagaggtttctaacaggtgcccgtgcgactgagacctatatctac
gaatacaacaagtatccatatggcctcattggtcctgctacaatcatgtggcacgccgac
gctccagggccgaatgggccgcaggcccctgccattatcagaggcacgaacgccaaagga
aaaggcgatggaaaggagaaggaagtgccatgggtagacccagagcggcgtatccggatc
gtctggatccgtgtccatccttcgatgacggaagaggtacacgaggcgctccgtgtctcg
acggcctttgcactcgacgcggcgaagcagacgggacgcactgctgaggtggaaattgcg
gacctcagagagcacttcaatgtgttcgagatcatgggcccaaaggcaagccaggtcatc
aagggtgccttaaaacctgtagacgacaagcgagacgagttcaagcggttctggacctct
ttgaaccgcatacagtccgcaggcgcagtgccgcgagggatggtgattggtttcacggtc
cacgacccgaggctcagtttcccgcctaagaacgtgaaactgaatatcgagagtggacca
tcgctttcgccagcgtccaccgtttttccttctgcttgtctggctcaaagccagatttgg
gacgaagatgtccggatggtcctgcgcaaaccgaggtacaagaagaaagacttagaccag
cgtcgatcaaacaaccttgtccccggaacgccgctgaagtccgaacgcaacgacgaccgc
gtccccgttctcctcattcaacgctcggtggagaatgccgccctctcccagattcaaaac
tttccccgcctctcgtcgacgacgtccctgcacggctggacgctgatcgtcccccagggc
tggggcatgcccttcctgtcctctctcatctataccggcacccgcgtcggcggacaacgt
gaacgccagacacaggcgttcgaagcgggttgcacatatttcccgcgcgacttcccgacg
acagaggcgtacgacgtgtacgccgaggacaaggaggacgaggaacgcgaggcatgggag
cggaagcccccagcgaaacggccgaattacgagaagctggggacgaggagcccgtggagg
ccagattggggcgtcgtgcttggtatcgaagagccagcgaagtcgcacccggaagcggag
gagctcctagacacgcaaagggacccgatggtcgctgatgaggcggcggcaacggaagga
aataggaaggttgatatatggctgctgaggggcccggacatcccacagcttgtagcggag
gtctcgtcgatgctgaacccggccgccggactactcagtcaggtcaaccaggcgcgcgcg
aaacgcaagcttgacccgcttccggtgaacttgcatgcagacgacttgatcaagggcgcg
ctcgttcaggtcagcattacgttgtgcgggcgagggtttcccgacgatttggctatcatc
taccgcgtcggagatgacgaggcgaaggagtggatgagggccgaagtgaataagaaaaat
gggctctcgttgctccaagatgggcccgacgagactgagctatcacaggttcctcctccg
tctgagggtatcattggatatgtcacgacgggtaacttttcgctctcgcttggtgaagga
catgcggttggcgctatacccctttcgcagtatctggacctgcgcaagcaagcccagagg
ctgcgcaacgatacgaagctgctcgtcaagttgcgtaatcgtcatgagacacgttgccgg
gcggcgctagtggagctcttgcattga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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