KEGG   Desulfurobacterium thermolithotrophum: Dester_0307
Entry
Dester_0307       CDS       T01427                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
dte  Desulfurobacterium thermolithotrophum
Pathway
dte02024  Quorum sensing
dte03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dte00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dester_0307
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dester_0307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dte03019]
    Dester_0307
   03036 Chromosome and associated proteins [BR:dte03036]
    Dester_0307
Messenger RNA biogenesis [BR:dte03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Dester_0307
Chromosome and associated proteins [BR:dte03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Dester_0307
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ADY72963
UniProt: F0S220
Position
293493..293726
AA seq 77 aa
MNLQDTYLNRLRKERIPVSVFLSKGTRLQGVITFFDQFTILLENGGSQQLVYKHSIATIV
PSRPVKNLFKEEENKNG
NT seq 234 nt   +upstreamnt  +downstreamnt
atgaatcttcaagacacttatctcaacaggcttagaaaggaaagaattccagtaagtgta
ttcctatcaaaaggaacaaggcttcagggtgtaattactttctttgaccagtttacaatt
cttttagaaaatggaggaagtcaacagttagtctataaacactctatagccacaatagtt
ccatcaagacctgtgaagaacctctttaaagaggaagaaaataagaatggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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