KEGG   Delftia tsuruhatensis: BI380_18470
Entry
BI380_18470       CDS       T04496                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
dts  Delftia tsuruhatensis
Pathway
dts03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dts00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BI380_18470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dts03400]
    BI380_18470
Enzymes [BR:dts01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BI380_18470
DNA repair and recombination proteins [BR:dts03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BI380_18470
    RecFOR pathway proteins
     BI380_18470
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 nSTAND3 AAA_14 AAA_16 AAA_22 AAA_3 AAA_18 Rad17 TsaE NTPase_1 RNA_helicase GGDEF_2 DUF815 AAA_33 AAA_17 AAA_28 AAA_19 Sigma54_activ_2 ABC_tran NB-ARC AAA_24
Other DBs
NCBI-ProteinID: AOV03190
UniProt: A0A1D8J3D6
Position
complement(3969278..3970363)
AA seq 361 aa
MSIHTDDFGQGGFPQGGFAPDKAPEKPRMISAAPVSRGEEAMERALRPKLLQEYVGQAKA
REQLEIFIGAARKRSEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDL
AALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTL
VGATTRAGMLTNPLRDRFGIVARLEFYTAEELARIVRRSAGLLNAPIDDEGAFEIARRSR
GTPRIANRLLRRVRDYADVRGDGSITRELADRALAMLDVDPQGFDIMDRKLLEAVVHRFD
GGPVGLDNIAASIGEEAGTIEDVIEPYLIQQGFLQRTPRGRMATQAAYRHLGLPVPGDDA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagcatccataccgacgatttcgggcagggcggctttccgcagggcggtttcgcgccc
gacaaggcaccggaaaagccgcgcatgatttcggcagcgccggtctcgcgcggggaagag
gccatggagcgcgccctgcgccccaagctgctgcaggagtacgtgggccaggccaaggcg
cgcgagcagctggagatcttcatcggcgcggcccgaaagcgcagcgaggcgctggaccat
gtgctgctgttcggcccgccgggcctgggcaagaccacgctgtcgcacatcatcgcggcc
gagctgggcgtgaatctgcgccagaccagcggccccgtgctggaaaagcccaaggacctg
gcggcgctgctgaccaacctcgaagccaacgatgtgctgttcatcgacgagatccaccgc
ctgtcgcccgtggtcgaggaaatcctctacccggcgctggaggactaccagatcgacatc
atgatcggcgaagggccggcggcgcgctccatcaagctggacctgcagccgttcacgctg
gtgggcgcgaccacgcgcgcgggcatgctgaccaacccgctgcgcgaccgcttcggcatc
gtggcgcggctggagttctatacggccgaggagctggcgcgcatcgtgcggcgcagtgca
ggcctgttgaacgcgccgattgacgacgagggcgccttcgagatcgcgcgccgctcgcgc
ggcacgccgcgtattgccaaccgcctgctgcgccgcgtgcgcgactatgccgatgtgcgc
ggcgacggcagcatcacgcgcgagctggccgaccgtgcgctggccatgctcgatgtcgat
ccccagggcttcgacatcatggaccgcaagctgctggaggccgtggtgcaccgcttcgac
ggcggccccgtgggcctggacaacatcgcggccagcattggcgaggaagcgggcaccatc
gaggacgtgatcgagccctacctgatccagcagggctttttgcagcgcacgccgcgcggg
cgcatggcgacccaggcggcgtaccgccacctgggccttcccgtgccgggcgacgacgcc
agctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

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