KEGG   Dyella thiooxydans: ATSB10_06660
Entry
ATSB10_06660      CDS       T04308                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
dtx  Dyella thiooxydans
Pathway
dtx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dtx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ATSB10_06660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dtx03400]
    ATSB10_06660
DNA repair and recombination proteins [BR:dtx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATSB10_06660
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 HHH_2 HHH
Other DBs
NCBI-ProteinID: AND68120
UniProt: A0A160MY23
Position
699691..701517
AA seq 608 aa
MSPASEPAFDGKAFVRTLSTSPGVYRYFDADGELLYVGKAANLKKRVGSYFLKPRMEPRI
ASMISQIARCETTVTRTAGEALLLESQLIKSLKPRYNIMLRDDKSYPYVYLSGSEDYPRL
AFHRGARNLPGRFFGPYPSAFAVRESLSLMQKLFQVRQCEDSYFRNRSRPCLQHQIGRCT
APCVGLISVDDYRADVRHAEMFLEGRSSAVIDELAASMEQASAQLNFERAAVLRDQVAAL
RKLQAQHHVHGASADMDVIACRIESGLACVSVLFFRNGISLGTRDFFPRLPLDAEPGDLL
AQFVAQYYLDRPVPRELIVGEEMPDQDVLAEVLAEQSGHAVEIKHRVRGDRAQFLQLAQR
NAQASLTQRLASRQTLGTRFDDLQKLLELDEPPKRIECFDISHTRGELTVASCVVFGPEG
PDKSHYRRFNITGITPGDDYAAMHQALTRRFRKVAEGEGAKPDVLLIDGGGGQVAQALDV
LRELGVAGITVVGVAKGPGRRAGEETLVLADLGREIHPGAASPALHLVAAVRDEAHRFAI
SGHRKRREKARERSVLEDVPGVGARRRSALLKAFGGLAGVEAAGVEELMRIKGIDRGLAE
RIYAAMHP
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtctcccgcttccgagccggccttcgacggcaaggccttcgtccgcaccctttccact
tcgcccggcgtctatcgctatttcgacgcggacggagagctgctctacgtcggcaaggcc
gccaacctgaagaagcgggtcggcagctatttcctcaagccgcggatggagccgcggatc
gcctcgatgatctcgcagatcgcccgttgcgagaccacggtgacccgtaccgcgggcgag
gcactgctgctggaatcgcagctgatcaagtcgctcaagccgcgctacaacatcatgttg
cgcgacgacaagagttatccgtacgtctacctgtcggggagcgaggattacccgcggctg
gccttccaccgcggggcgcgcaacctgccggggcgcttcttcgggccgtatcccagcgcg
ttcgccgtacgtgagagcctcagcctgatgcagaagctgttccaggtacggcagtgcgag
gacagctatttccgcaatcggtcgcgaccctgcctgcagcaccagatcggtcgttgcaca
gcgccgtgcgtgggactgatcagcgtcgacgattaccgtgccgacgtacggcacgccgag
atgttcctcgaggggcgctccagtgcggtgatcgacgaactggccgcctcgatggagcag
gccagcgcccagctgaacttcgagcgcgcggcggtgctgcgggatcaggtcgccgcgttg
cgcaagctgcaggcccagcaccacgtgcacggtgccagcgcggacatggacgtgatcgcc
tgccgcatcgaatcggggctggcctgtgtcagcgtgctgttcttccgcaacggcatcagc
ctgggcacacgcgatttcttcccgcgcctgccgctggatgccgagccgggcgacctgctg
gcgcagttcgtggcgcagtactacctggatcgacctgtgccgcgcgagttgattgtcggc
gaggagatgcccgaccaggacgtgctggccgaggtgctggccgagcagagcgggcatgcg
gtggagatcaaacatcgcgtgcgcggcgaccgcgcccagttccttcagctggcccagcgc
aacgcgcaggcttcgttgacccagcgactggccagccggcagaccctgggcacgcgcttc
gacgacctgcagaagctgctggaactggacgaaccaccgaaacgcatcgagtgcttcgac
atcagccacacccgtggcgaattgaccgtggcctcctgcgtggtgttcgggccggaagga
ccggacaagtcgcactaccgccgtttcaacatcaccgggatcactcccggcgacgactac
gccgccatgcaccaggcgctgacccggcgcttccgcaaggtggccgagggcgagggggcg
aaaccggacgtgctgctgatcgacggtggtggcgggcaggtggcgcaggcgctggatgtg
ctgcgcgagctgggcgtcgccggtatcaccgtggtcggcgtggccaagggcccgggtcgg
cgcgcgggtgaggaaaccctggtgctggccgatctggggcgcgaaatccacccgggagcg
gcttcgccggcgctgcacctggttgcggccgtgcgcgacgaggcgcaccgtttcgccatc
agcggtcatcgcaagcggcgcgagaaggcgcgcgagcgcagtgtcctggaggacgtgccg
ggggtgggcgcgcgtcgacgcagtgcgttgctcaaggccttcggcgggctcgccggcgtc
gaggccgccggcgtcgaggaattgatgcggatcaagggtatcgatcgaggcctggccgag
cgcatctacgcggccatgcatccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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