KEGG T02064: Deval

Desulfovibrio vulgaris RCH1: Deval_0411

Entry

Deval_0411 CDS T02064

Definition

signal transduction histidine kinase with CheB and CheR activity

Orthology

K13924

two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]

Organism

dvg Desulfovibrio vulgaris RCH1

Pathway

dvg02020	Two-component system
dvg02030	Bacterial chemotaxis

Module

dvg_M00506

CheA-CheYBV (chemotaxis) two-component regulatory system

Class

Environmental Information Processing; Signal transduction; Two-component system [PATH:dvg02020]
Cellular Processes; Cell motility; Bacterial chemotaxis [PATH:dvg02030]

SSDB

Motif

Pfam:

CheB_methylest CheR HATPase_c Response_reg HisKA PAS_4 PAS_9 PAS_3 PAS_10 PAS CheR_N ATG16 PAS_8 PAS_7 IncA Methyltransf_18 Fez1 Methyltransf_12 DUF4201 Laminin_II Sec8_exocyst MCC-bdg_PDZ Spc7 DUF342 CENP-H GAS LMBR1 Atg14

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(513991..518598)

AA seq 1535 aa
MAAPRLDIPPTAPSGTLPEENAVPRQVDSHRAAKGRAGHHPTTHDAVHLPLVVGIGASAG
GLEALEGLFRHMPTTTGAAFVVIQHLSPDFPSFMDELLARQTVMTIVVVQDGMCPAPDHI
YLLPPGKEMEITLDGFILRDKSSYDNRPSMPINTFFASLAAWYGENAAGVVLSGTGTDGA
SGLEAISAAGGLVLVQLPESAAFDGMPKAAAAACRAAVLATPDEMPDILAAFISGSPLPF
EHPGLPADPASGGPAPDALQTIFTLLQRHGGLDFRDYKPATIARRIMRRIRLEQHADIEG
YARHLRDDPQAVQTLFRDLLIGVTTFFRDETAFDTLAATVIPELFRKQGDRGEIRLWVAG
CASGEEAYSLGMLLLEAAPQFDFTGRISIFATDVHRHSLDRASAGVYTKDSLQALSPRRL
QRFFIPEGDETYRVAPELRSLVLFTQHNILADPPFTRVDLVSCRNLLIYFGVDAQERAIA
RLHMALRPGGVLFMGASETTGRLHPIFEPLDPRLRIFTKRPDTLGMTATHLVHPAVIDAH
RLATSSPQPSERQLLRDYDALLQRFAPDGMLVDDRFAVLHFFGNGASYLTQHTGRTDRPI
TDMVEGDLRLALSSALQRASTTGETARFKSIRVPGNGGDRLVDVEVMPIGNKPSDGKHYH
VALQSSHPVLIRPLVEPAATGHGTGLLASRVAELEAELAETRSSLRDSIEQVHVTNEELQ
ATNEELLSANEELQATNEELHSINEELYTVNAEFERKNDQLRILGEDYAQLFDTIPIAIA
SLDESLRVRRFNAGMSAIFHLQPHDVGRPLQQIASCLAEPDNLFKSLALGLSEGGTHDSE
ARLTDGRWCQQRIHAVRDETGATEHMLLTFMDITHVKHAEAMRQEARSLDEVSRNVPGVV
FKLCAPHDGNIRVEYVGGGTVELCGLSQEEIKADPHALVALFGPDVVPHILAGISATDGE
GTPVDVEIPLHCTGGTKWVHVQATSTPARGGGTEWYGVAVDATERRYDATRMHNAADRYL
RILDHAPMLIWRSDTTGACDWFNTTWLDFTGRTMEQEYGYGWAGGVHPDDYDRCVSIYQK
AFALQQAFEMNYRLKRHDGQFRWLVDCGKPLPDLDGTFSGFIGYCYDITDAVNALESMCE
ASKRAEEANRTKSEFLANVSHELRTPLNGALGMLQLLELSSLSPEQRQYVTTAIRSGQNL
VRLLSDILDLSRIEAGKLVIEAIPCDIRELVDEVFSTFSLDATGKGITLETTIAPGTPTY
VRTDPLRLRQTLFNLVGNAVKFTEKGGVRVEFSTASMRGDAIVLFCTVRDTGPGIPEDRI
ESIFQPFTQLDGSYTRRHSGLGLGLGIVCRLMELFGGSIEVESAPDMGTAMHFAIPVGKT
RRPQGRKVKETEDEGDRHALYLLVAEDDAINRLTLTRMLEQLGHRAHAVEDGSQALQALA
EQHFDAVFLDIQMPVLDGMATLQAIRTGQVAGLPPTIPVVAVTAHAMQGDRERFMAKGAD
AYVQKPYDFTALEKALATLGRRVRPEGRTREDYSL

NT seq 4608 nt +upstreamnt +downstreamnt
atggctgcaccccgtctcgacattcccccaacagcgccttccggcacgttgccggaagag
aatgccgtgcctcggcaggtcgacagccatcgcgccgcgaaggggcgtgccgggcaccac
cccaccacacatgatgccgtgcatcttccccttgtcgtcggcataggcgcctctgcgggg
ggattggaagcccttgagggcctcttcaggcatatgcccaccaccaccggggccgcgttc
gtggtcatccagcatctgtcacccgatttcccaagcttcatggatgaactgctggcccgc
cagactgtcatgaccatcgtcgttgtgcaggatggcatgtgcccggcacccgaccacatc
tacctgttgccgcccggcaaggagatggagataacgctggacggtttcatcctgcgcgac
aagtcttcatatgacaaccgcccctccatgcccatcaacaccttcttcgcctccctcgcc
gcatggtatggagagaacgccgcaggggtcgtcctttccggcaccggcaccgacggggcg
tcggggctggaggccatctccgccgccggaggtctggttctcgtccaactccccgaaagc
gcggctttcgatggcatgcccaaagcagcagccgcggcctgccgggctgccgtgcttgcc
actccagacgaaatgccggacatactcgccgccttcatatcgggctcgccacttccgttc
gaacatcccggcctgcctgccgaccccgcctccggaggccctgcccccgacgcgctgcag
accatcttcacgctgctgcaacgccatggcgggctcgactttcgcgactacaaaccggcc
accatcgcacggcgcatcatgcgccgcatccggcttgaacaacatgccgacatcgaaggt
tatgcccggcaccttcgtgacgacccgcaagcggtgcagaccctgttccgcgacctgctc
atcggggtgacgaccttcttccgggatgaaaccgccttcgacacactcgccgccacagtc
ataccggaacttttcaggaaacagggcgaccggggtgaaatccggctgtgggtcgccgga
tgcgccagcggcgaagaggcctattccctcgggatgctgttgctggaagccgccccgcag
ttcgatttcacggggcgcatctccatcttcgcgaccgacgtccacaggcactccctcgac
cgcgcctcggcaggggtctacacgaaagacagcctgcaggccctctcaccccgacggctg
caacgattcttcattcccgaaggtgatgagacctacagggtcgccccggagttgcggtct
ctggtgctgttcacgcagcacaacatcctcgccgacccgcccttcacccgtgtcgacctc
gtcagttgcagaaacctcctcatctatttcggggtggatgcacaggagagggccatcgcc
cggttgcatatggccctgcgccccggcggtgtcctgttcatgggagcgagcgagaccaca
ggacgcttgcatcccatcttcgaacctctcgacccgcggttacgcatcttcacgaaacgt
cccgacaccctcggcatgacggcaacccatctggtgcacccggctgtcatcgacgcgcac
cgtctggccacatcctcgccacaaccctctgaacgacaactgctgcgcgactacgacgcg
cttctgcaacgtttcgccccggacggcatgcttgtggacgaccgtttcgccgtgctgcat
ttcttcggcaacggggcctcatatctcacgcagcataccgggcgcaccgaccgccccatc
accgacatggtcgagggcgacttgcgccttgccctctcctccgcgctgcaacgggcttct
acgaccggggagaccgcccgcttcaagagcatccgcgtaccgggcaatggcggggaccgc
ctcgtggatgtcgaggtcatgcccatcggtaacaagccatccgacgggaagcactaccac
gtggcgctccagtcatcgcaccctgtgctcatccggcctcttgtcgaacccgcagcgacg
gggcacggcacaggactgctggcgtcacgggtcgccgaactcgaagcggaacttgccgag
acacgttcgagcctgcgtgacagtatcgaacaggtgcacgtcaccaacgaggaattgcag
gccaccaacgaggaactgctctcggccaatgaagaactgcaggcgacgaacgaagagctt
cattccatcaatgaggaactctacaccgtcaacgccgaattcgagcgcaagaacgaccag
ctacgcattcttggagaagactacgctcaactcttcgacacgattcccatcgccatcgcc
tcgctggacgaatcgctacgggtgcggcgtttcaatgcgggcatgtctgcaatcttccac
ctgcaaccccacgatgtgggaaggccgctgcaacagatcgcctcgtgccttgcggaacct
gacaatctcttcaaatcgctggctcttggcctcagtgaagggggaacacacgacagcgag
gcacgcctcacggatggcaggtggtgccagcaacgcatccatgccgtccgtgatgagaca
ggggcgacagagcatatgctgctcaccttcatggacatcacccacgtcaaacatgccgaa
gccatgcggcaggaggcacgttctcttgacgaggtctcgcgtaacgttcccggcgtggtg
ttcaagttgtgcgccccgcatgatggtaacatcagggtcgagtacgtcggcggcggaacg
gtcgagttgtgcgggctgtcgcaggaagagatcaaagccgacccgcacgcgctggtcgcc
ttgttcggcccggatgtcgtgccacatatccttgcgggcatctctgcgacagacggggaa
gggacgcctgtggatgtcgaaatccccctgcattgcacaggcggtacaaaatgggttcat
gtacaggccacctccactccggcacgggggggcggcacggaatggtacggcgttgccgtg
gacgccacggaacgacgatacgacgcgacgcgcatgcataatgccgccgacaggtatctg
cgcatcctcgaccacgcccccatgctcatctggcgtagcgacaccactggtgcatgcgac
tggttcaacaccacatggctcgacttcacgggccggaccatggaacaggagtatggctac
ggctgggccgggggagtgcaccccgacgattacgaccgttgcgtcagcatctatcagaaa
gccttcgcactccagcaggcattcgagatgaactaccgcctgaagcggcacgacggtcaa
ttccgctggctcgtcgactgcggcaagccccttcccgacctcgacggcaccttctccggt
ttcatcggctactgctatgacatcaccgatgcggtcaacgcgctggaatccatgtgcgag
gcgagcaaacgcgccgaagaggcaaatcgtaccaaaagcgagttccttgccaacgtcagc
cacgaattgcgcactccgctcaacggagcgctgggcatgttacaactgctcgaactgtcg
tccctctctcccgaacagaggcagtatgtgaccaccgccatccgttccgggcagaacctc
gtgcgactgctcagcgacatcctcgacctttcccgcatcgaggcgggcaagcttgtcatc
gaagccatcccctgcgacataagggaactggtggacgaggtgttctccaccttcagcctc
gacgccacaggcaagggcatcacgctggagacgaccattgcccccggtacccccacctac
gttcggacagaccctctgcgcttgcggcagacgctgttcaaccttgtcggcaacgcggtc
aagttcacggagaagggtggcgtacgtgtggagttttccacagcctccatgcgcggcgac
gccatcgtcctgttctgtaccgtacgcgacaccggtcccggcatccccgaagacagaatc
gagagcatcttccagcccttcacccaactggacggctcttacacacgccgtcacagcgga
ctgggactcggccttggcatcgtatgcagactcatggaactcttcgggggcagcatcgaa
gtggagagcgcgccggacatgggtacggccatgcatttcgccatcccggtcggaaagacc
cggcgcccgcagggcaggaaggtcaaggagacggaggatgaaggcgacaggcatgccctg
tacctgctcgtggcggaagacgatgccatcaatcgcctcaccctgacacggatgctggaa
cagctgggtcaccgcgcccatgccgtggaagacggcagtcaggcgttgcaggcactcgcg
gaacagcacttcgatgccgtgttcctcgacatccagatgcccgtcctcgatggcatggca
accttgcaggccatccgtacgggacaggtcgcgggactgccccccaccattccggtcgtg
gccgtgaccgcacacgccatgcagggcgaccgagaacggttcatggcgaaaggggccgac
gcctatgtgcagaagccctacgacttcacagcactggagaaggcccttgcgaccctgggg
cggcgggtgcggcccgaaggccgcacccgtgaagactattcgttgtaa

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DVG (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (41)   

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