KEGG   Desulfovibrio vulgaris RCH1: Deval_3010Help
Entry
Deval_3010        CDS       T02064                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dvg  Desulfovibrio vulgaris RCH1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dvg00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Deval_3010
Enzymes [BR:dvg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Deval_3010
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Deval_3010
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3431333..3432430
Genome map
AA seq 365 aa AA seqDB search
MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLCTPAAFTEAVQGQRIADVGRRG
KLLLVAFASLPPVGHAGQPRPEGLSSSTVRDFLVTHGFHAAGCATSVHACAPLLADGQQT
RGRLAGHGDGMDGTSRTGSTLPGTGGTENSDAVAVADDDTVLGLAFHLKMTGRLFIHPPA
TPAGIHTRVVFDLEGGTRLFFDDARKFGYVRCITRRSLALWPFWRDLGPEPLETEARGFA
ARLARRRGRIKALLLDQKVVAGVGNIYADESLFRAGIRPDTQAHTLTPERLFALHGHLQD
VLRESIAECGSSIRDYRDAHGDAGAFQNSFRVYGRGGQPCRHCGTTLATAQVAGRTTVFC
PQCQR
NT seq 1098 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactgcctgaagtggaaaccatcgcctgcggcttgcgtccggccctttcaggg
cggcgcatcgtgggtgttacggtgcacaaccccggcacgctggaaggtccgctgtgcaca
cctgccgccttcacggaggccgtgcaggggcaacgcatcgcggatgtgggacggcgcggc
aagctgctgcttgtggcgttcgcgtcattgccacctgtcggccacgcaggacaaccgcga
cctgaaggtctctcctcttccacggttcgcgacttcctcgtcacgcacggctttcatgcc
gcagggtgcgccacgtcagtccatgcctgtgccccccttcttgcggacgggcaacagaca
cggggccgtctcgcggggcacggcgatggcatggatggcacatcgcggacgggaagcacc
ttgcccggaaccggaggcaccgaaaactctgacgctgtagccgtagcggatgacgacacc
gtcctcggtctcgccttccacctcaagatgaccggacgcctcttcatccacccgcccgca
accccggcgggtatccacacccgcgtggtcttcgaccttgaaggcggcactcgcctcttc
ttcgatgacgcccgcaagttcggctatgtgcgttgcatcacccggcgcagccttgcgctg
tggcctttctggcgcgacctcggccccgagcccctcgagactgaagcgcgcggcttcgcg
gcgcggctcgcccgcaggcgagggcgcatcaaggccctgttgctcgaccagaaggtcgtg
gcgggggttggcaacatctatgccgacgagtcgctgttccgtgccggcatccgccccgac
acgcaggcccataccctgacgccggaacgcctcttcgccctgcacgggcatcttcaggat
gtgctgcgcgagtccatcgccgaatgcggcagttccatccgtgactaccgcgatgcacac
ggcgatgcgggggccttccagaacagcttcagggtctacgggcggggcgggcagccttgc
cgtcactgcggcacgactctcgccacggcgcaggtagcaggacgcaccacggtcttctgc
ccgcagtgccaacggtga

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