KEGG T01066: Dvir

Drosophila virilis: Dvir_GJ13670

Entry

Dvir_GJ13670 CDS T01066

Definition

GJ13670 gene product from transcript GJ13670-RA

Orthology

K10843

DNA excision repair protein ERCC-3 [EC:3.6.4.12]

Organism

dvi Drosophila virilis

Pathway

dvi03022	Basal transcription factors
dvi03420	Nucleotide excision repair

Module

dvi_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:dvi03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:dvi03420]

SSDB

Motif

Pfam:

Helicase_C_3 ResIII Helicase_C SNF2_N DEAD AAA_34

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

AA seq 809 aa
MGPPKKSKKDRGASDKFAKKRRAEDEAFTQLVEDNDSMDNASESDGVPGAASKNAETNDE
NINTDEYGAKDYRSQMQLRPDHANRPLWVAPNGHVFLESFSPVYKHAHDFLIAISEPVCR
PEHIHEYKLTAYSLYAAVSVGLQTHDIVEYLKRLSKTTIPEGILEFIRLCTLSYGKVKLV
LKHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEGFIQGTMDGKAITQFGTKLPAGPD
KPGEDSASTSAAATAAAAPAEGAAATVTVPEDITDFYEKIDKEEEDEDEANLKTVSFEVS
QEKIELIQKRCIEIEHPLLAEYDFRNDTNNPDINIDLKPAAVLRPYQEKSLRKMFGNGRA
RSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFT
SEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRR
VLTIVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKKGYIARVQCAEVWCP
MSPEFYREYLTTKTSKKMLLYVMNPSKFRSCQFLIKYHEKRGDKTIVFSDNVFALKHYAI
KMNKPFIYGPTSQNERIQILQNFKFNAKVNTIFVSKVADTSFDLPEANVLIQISSHGGSR
RQEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTMEMSYSRKRQRFLVNQGYSYKVITHL
KGMDTETDLMYGTQEEQGQLLQLVLSASDLDCEDEKVPGEPGYRPSGAGGTTRRMGGLSS
MSGGDDAIYYEHRRKNVGSVHPLFKKFRG

NT seq 2430 nt +upstreamnt +downstreamnt
atggggccgccaaaaaaatcaaaaaaggaccgtggtgcgagcgataaatttgctaagaag
cgtcgcgcggaggatgaggcgttcacccagctggtggaagacaatgacagcatggacaac
gccagtgagtcggacggagtgcccggcgccgcatcaaagaacgccgaaaccaatgatgag
aacatcaacacagacgaatacggtgcaaaagattatcgcagccagatgcaactgcgccca
gatcacgccaatcgcccattgtgggtggcacccaatgggcacgtgtttcttgagtccttt
tcgccggtctacaagcatgctcatgactttctcattgccatctcggagccagtatgtcgg
ccggaacacattcacgaatacaaactgacggcctatagcttgtatgcagctgtgtctgta
ggactgcaaacacacgacattgtggaatatctgaagcgcttgagcaagaccaccattcca
gaaggcatattggaattcatacgcctttgtacgctctcgtacggcaaagtgaagcttgtg
ctgaagcataacaaatattttattgagtccccacatccagaggtgctgcagaaattgctt
aaggacccggttattcaaaagtgtcgactgatacgcagcgagggcgagggttttatacaa
ggcaccatggatggtaaagctattacccagttcggcaccaagttaccggcggggcctgat
aagccaggggaagattcggctagcacctcggcagcagcaacggcggccgccgcacccgca
gagggtgccgctgcaactgttacagtacccgaggacattaccgacttctacgagaagatt
gacaaggaagaggaagatgaggacgaagctaatctaaagacagtatcatttgaggtatcg
caagaaaaaattgagttaatacaaaaacgctgcattgaaatcgagcatccgctgttagca
gagtatgattttcgcaatgataccaacaatccagatattaatattgatctgaagccagca
gccgttctgcgtccataccaggaaaagagcctgcgcaaaatgtttggcaatgggcgagcc
cgctcgggcgtaattgtactgccgtgcggcgcaggtaaatctttagtaggtgtcactgct
tgttgtacagtgcgtaagcgggcattggtgctgtgcaacagtggcgtgtcagtggaacag
tggaaacagcagttcaagatgtggtccacggcagatgatagcatgatttgccggtttaca
tcggaggctaaggataaacctatgggctgtggcatattagttaccacatactcaatgatt
acacacacacagaagcgttcatgggaggcggaacaaaccatgcgctggctgcaggagcag
gaatggggcatcatggtgttggacgaggtacacaccattcccgcaaagatgttccgccgt
gttctcaccattgtgcagtcccactgcaaacttggcttaacggctacgctactgcgtgag
gacgacaaaattgcggacctcaattttttaattggtcccaagctgtacgaggcaaactgg
ctagagctccaaaagaagggctatatagcacgcgtgcagtgtgccgaggtatggtgtccc
atgtcaccggagttctatcgtgaatatctaaccaccaagacgtctaagaaaatgctgctc
tatgtgatgaacccctcaaagtttcgcagctgccaatttctaataaaatatcatgaaaaa
cgtggcgacaaaactattgtcttctctgacaatgtgtttgccttaaaacactatgccatc
aagatgaacaagccgttcatctatggacccacatcccagaatgaacgtatacaaatccta
cagaatttcaagtttaatgccaaggtcaacaccatatttgtgtccaaagtggccgatacc
agttttgatctgcccgaggcaaatgtgctcattcaaatttcgtcgcatggcggctcacgt
cgccaagaggcacagcgtttgggtcgtattctacgcgccaaaaagggtgccattgccgag
gaatacaatgcatttttttacacgctcgtttcccaggatacaatggagatgagctattcg
cgcaagcgccagcgtttccttgtgaatcagggctatagctacaaggttataacacatctt
aagggcatggacactgaaaccgacctaatgtacggaacacaggaagagcagggccagctc
ttgcaactggtgttgtctgcctccgatttagactgcgaggatgaaaaagtgccaggcgaa
ccgggttatcgtcccagcggtgctggtggcacgacaagacgtatgggcggcctcagctca
atgtcaggtggtgatgatgccatctactatgagcatcgacgcaagaacgtcggcagcgtg
catcctttgtttaagaaattcagaggataa

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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