KEGG T01066: Dvir

Drosophila virilis: Dvir_GJ17053

Entry

Dvir_GJ17053 CDS T01066

Definition

GJ17053 gene product from transcript GJ17053-RA

Orthology

K12811

ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]

Organism

dvi Drosophila virilis

Pathway

dvi03040

Spliceosome

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:dvi03040]

SSDB

Motif

Pfam:

DEAD Helicase_C SNF2_N

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

AA seq 1244 aa
MRINFNVNRRDRDRERERDRDRERERDKHYESRSGRGDYDNGKSSRNGGSLSGSSRSGRE
ERKRVKEPAKDNDRGLGPRRDEKRRKRSRSKDYEKDKRQLERERDKDKDRERERERERER
ERERDRERERQRERDKERERERDRERERDKERERERQRELDMRRAAVPAAPLVIPVGSSS
SSTDNEEEEEIDKEEQQRRLEQEMIKRRERIERWRAERKQREQEAGKRDVKAPLAPTVTK
SAKKWSLEDESEEDDSNPAPIIDTDVGKKEPDSPPSKFHSIRKRFDDDLVESNFAPLKRP
TFSKVLGMVLTSPVVAATTTTTTATAAATTTTTSTSTATTTATAAAKPEPTADEVVQLKV
EASKVEQPAEVKPAVDPPKEETPMVTEPAAAAEAEEPEDDVDPLDAYMQEVNREMRRVNH
FVSPAKAQGVVILTGVAKKKTNTVKKGELIEQNMDSLEYSSEDELEDIRDTAVNLAMKHR
KELAKIDHSSVSYAPFRKNFYVEVPELARMTNSEVDKYRSELEGVQVKGKGCPKPIKTWA
QCGVSKKEMDVLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHIL
DQPSLEDGDGAIAIIMAPTRELCMQIGKDIRKFSRSLGLRPVCVYGGTGISEQIAELKRG
AEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQ
TVMFSATFPRQMEALARRILKKPVEVIVGGRSVVCKDVEQNVVILSDEAKFFKLLELLGV
YQETGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIA
TSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGSAYTFITPEQSRYAGDVI
RALDLSGTPVPPDLQTLWNDYKAAQEAEGKTVHTGGGFSGKGFKFDEQEFNAVKESKKLQ
KAALGLADSDDEEDIEQDIDQQIEQIFAAKRTVKDTSLAGTALAAANAVVNALSAVITSP
LNVAQQQQQQQQQQQQQQQQQQQQQQQQQLATAVAMGSDKLELAKRLASKISSSRNLDTK
ATQAAAESILKGQSGVGTAQPMLTARTVVEQLAAKLNNKLNYQPKEDEEGLAALMGTNSN
SFTKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPQGKNPPEGERKLY
LAIESCSELAVQKAKREITRLIKEELLKLSSAHHVFNKGRYKVV

NT seq 3735 nt +upstreamnt +downstreamnt
atgcgtattaacttcaatgttaacaggcgtgaccgcgaccgagagcgggagcgtgacagg
gatagggagcgggaacgtgacaagcactatgagagtcgcagcgggcgcggcgactacgac
aatggcaaatcttcacgcaacggaggcagtttgagcggcagttcgcgcagcggccgcgag
gagcgtaagcgggtcaaggaaccggccaaggataatgatcggggtctgggcccgcgtcgc
gatgagaagcgacgcaagcgttctaggtcgaaggattacgaaaaggacaaacgacagctg
gagcgtgagcgtgacaaggacaaggatcgcgaacgtgagcgggaacgtgaacgcgagcga
gagcgcgaaagggacagagaacgggagcggcagcgagaacgggataaggagcgcgaaagg
gagcgagatcgtgaacgggaacgggataaggagcgtgagcgtgaacgccagcgcgaactg
gatatgcgtcgggccgctgtgccagctgcgcctctagtaatacctgttggctcctccagc
agctccacggacaatgaggaggaggaggaaattgacaaggaggagcaacagcgccgcctc
gaacaggagatgattaagcgacgcgaacgcattgagcgctggcgtgccgagcgcaaacag
cgagagcaggaggccggcaagcgagatgtcaaggcgccgttggcgccaacagtgaccaaa
tcggctaagaaatggagcctcgaggatgagtccgaagaggatgacagcaatccggcgcca
atcatagacactgatgtcggcaaaaaggagcccgattcgccgccatccaaattccatagc
atacgcaagcgtttcgacgacgatctggtcgagtccaattttgcgccgttgaagcgaccc
acctttagcaaggttctgggcatggtactgacatcgcctgttgttgcagcaacaacaaca
acaacaacagcaactgcagcagcaaccacaacaacaacatcaacatcaactgcaacaaca
actgcgacagcagcagccaaaccggagccaacggcagacgaggtcgtacagctaaaagtg
gaggcatccaaggttgaacagccagctgaagtaaagccagcagtcgatccgcccaaggag
gagacacccatggtgaccgagccggcggcagcagcagaagctgaggagcccgaggacgat
gtcgatccactggatgcgtacatgcaggaggtcaacagggagatgcgccgtgtcaatcat
ttcgttagtcctgccaaggcgcagggcgtcgtaatactgacgggcgtggccaaaaagaag
acgaacacggtaaagaagggcgaactaattgaacagaacatggacagcctggagtactct
agcgaggatgagctagaggatatacgcgacacggccgtcaatctggccatgaagcatcgc
aaagagctggccaagatcgatcattcctctgtcagctatgctccattccgtaagaacttc
tacgtcgaggtgcccgaactggcgcgcatgaccaactccgaggtggacaagtatcgcagc
gagctcgagggcgtccaggtcaagggcaagggctgtcccaagccgatcaagacgtgggca
cagtgcggcgttagcaagaaagagatggacgtgctgcgcaagttgggcttcgagaagcca
acgcccatacagtgccaggcgataccggcgataatgtctgggcgtgatctgataggtatt
gctaaaactggcagtggcaagacgttggcattcattttaccaatgtttaggcacattctg
gaccagccgtcgctggaggatggcgatggtgcaattgccatcataatggcgcccactcgc
gaactctgcatgcagattgggaaggatatacgcaaatttagtcgctcgctgggattgcgg
ccggtttgcgtttatggcggcaccggcatctccgaacagattgccgaactgaaacgtggc
gccgagataattgtctgtacgcccggccgcatgatcgatatgctggcagcaaattctgga
cgtgtcaccaatctgcgacgcgtcacctatgttgtcctggatgaggcggatcgcatgttt
gacatgggcttcgagccgcaggtgatgcgcattattgataatgtccgtccagatcgacag
acagtcatgtttagcgccacatttccacgccaaatggaggcattggcccgtcgcatactt
aagaagcccgtcgaggtgatcgtcggcggacgatctgttgtctgcaaggatgtcgaacag
aatgtggtcatactgagcgatgaggcgaagttctttaaactgctcgagctgctcggtgtc
tatcaggagacgggcagcattattgtctttgtcgataagcaggagaatgcggacattctg
ttgcgcgatctaatgaaggcatcctatccgtgcatgagcctgcatggcggcatcgatcag
tttgatcgcgactcgaccattattgacttcaagtccggcaaggtgcgtttgctgatagcc
acctcggtagcggcgcgcggcctcgatgtcaaggatctcatcctggtggtcaactatgat
gtgcccaatcattacgaggactatgtgcacagatgcggacgcactggccgcgctggcaat
aagggcagcgcctatacattcatcacgccagagcagtcacggtatgcgggcgatgtgata
cgagccttggatctatctggcacacctgtgccgcccgatctgcagaccctgtggaacgac
tataaggcggcgcaggaggcggagggcaagacggtgcatactggcggcggcttcagtggc
aaaggcttcaaattcgatgaacaggaattcaatgcggtcaaggagagcaaaaagttgcaa
aaggctgcgctcggcctggccgattccgatgatgaggaggacatcgaacaggatatcgat
cagcagatcgagcaaatctttgccgccaaacgtaccgtcaaggatacctcgctggccggc
acagctctggccgcggccaatgccgttgtgaatgccctcagtgcagttatcacatcgccc
ttgaatgtcgcccagcagcagcagcaacaacaacagcaacaacagcagcaacagcagcag
cagcaacaacaacaacagcaacagcagctggccactgctgtggccatgggctccgacaag
ctggagctggccaaacgtttggcgtccaagataagcagcagccgtaatctggacacaaag
gctacacaggcggccgccgagtcgatattgaagggccagtcgggcgttggtaccgcacag
cccatgctgacggcacgcaccgtggttgagcagctggccgccaagctgaataacaagctt
aattatcagcccaaggaggatgaggaggggctggcggcgctgatgggcaccaacagcaat
tcgtttaccaaatacgaagaggagctggagattaatgattttccgcaacaggcacgctgg
aaggttacgtccaaggaggcactggcccaaatctccgaatactcggaggctggtctgaca
gtgcgtggaacctatgtgcctcagggcaagaatccgcccgagggtgaacgcaagctctat
ttggccatcgagagctgtagcgaactggccgtgcagaaggccaagcgcgaaataacgcgc
ctcatcaaggaggagctgctgaagctcagctcggcccatcatgtgttcaacaagggtcgc
tacaaggtcgtctag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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