KEGG T01066: Dvir

Drosophila virilis: Dvir_GJ19276

Entry

Dvir_GJ19276 CDS T01066

Definition

GJ19276 gene product from transcript GJ19276-RA

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

dvi Drosophila virilis

Pathway

dvi03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:dvi03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

FlyBase:

UniProt:

AA seq 992 aa
MDISSTIKFRDICTMMERVKVAKNMQRKELILKRYYDSFCKHRETFRLSAGLTANQLEDG
ASSFYPVLRLLIPGADTSRDNYGLQITALGRLYTRVLQLAKDSDDAIRLQHRTVSTFRDY
ADVVHAVLLPRCHNEPSNLTLKQIHEMLDIIASEDTTVKERELIRFTELASAQEQKWLIR
ILLKSMGLGIGEQRIFGLLHPLAKDVYQRCSDLARICVLLADNKLLPEAPTGNIGSSSSS
GGSNAVTKLNTFIEPFHQIRPMLCERFPGKIEELMKSDVLYLETKMDGERFQLHYARGRF
KYISRKGADYTKSFGDSYETGTLTPHLRPLLPLGMESIILDGEMMIWDTQQLRYREKGEN
TDVKHLKPERSWRPCFVVYDLLYLNGESLLDMTYAQRTYKLQELISEQQGVLQIMKGQKI
SSLEHFNTLFQQMLDSNAEGIVLKKQNSIYKPGVRVGGGWYKDKADYIEGLITEFDVLII
GGFYNRKRTFIESFLLGVLKPGGETERDEVYSIGCVANNTRQRTVLHHELRPHWHDASTE
PPPLWYHYKPNEKEGSPDVWIQPEKSVILQVKAADLTPNGAFYTPKSLHFPRTQLLRDDK
VWNECMTLQEYTELCQGQGAIKKLNKRQANLNDFTTERKRIKLTTAERNRLGLAAYEKRY
DVQPLANSSQLFEGFSFCILSGTRGYSKQQLQTLAAENGGTIVQNPLPNDPKCICIAGDL
VYLVERLMQQQPRCNDILRLDWLLRVSQKQQIELRPRDVLSATDALQTQFDKSFDKLGDS
FTDLFGSLNELQEVLLDISEVQLDSVHVDEHDLDKLEQQLLGTASYNIFAKHHACFYNRD
ADELARLLFIQRGGQLVSETELQSINLVLVCSSRLNRQDFKQWYQEHFTTHPPQATRLSP
PNVNATLLTTRKYPTYMLSVLIVPLCDNLLPQRTPTNWLWSALLMKENLILPGYDLKTRF
KVMAVRKRLGRGRTSSLESKSKPSKERIGLRI

NT seq 2979 nt +upstreamnt +downstreamnt
atggacatctccagcaccataaaatttcgtgacatatgcacaatgatggagcgagttaag
gtggccaaaaatatgcagcgcaaggagctcattctaaagcgctattacgactccttctgc
aaacatcgggagacattccgactgagtgcaggtctgacggcgaaccagctagaggacggt
gccagcagtttttatccggtgctgcgtctcttaatacctggcgcggacacctcacgcgac
aactacggcctgcagataaccgccctgggacgactctacacgcgcgtcctgcagctagcc
aaagattctgatgatgcgatacggctgcagcatcgtactgtgtctacgttccgtgactat
gctgatgtggtgcatgctgtgctgctgcctcgctgtcacaatgagcccagcaacctgacg
ctcaagcaaatccatgaaatgctcgacattattgccagcgaggacacaactgtaaaggaa
cgcgaattgatacgctttacggagctggcctccgcccaggagcaaaagtggctgatacgc
attctgctcaagtcaatgggcttgggcattggcgagcagcgaatcttcggcttgctgcat
cccttggcgaaggacgtgtaccagcgctgctcagatctggcacgcatttgtgtgctgctc
gcggacaataagcttttgccggaggcaccgactggcaacatcggcagcagcagcagcagc
ggcggcagcaacgcagtcacaaaattaaacacgttcattgagccctttcatcaaataagg
ccaatgttgtgcgaaaggtttcccggcaagatcgaggagcttatgaagtcggatgtgctg
tacttagagactaaaatggatggcgaacgttttcagctgcactatgcgcgcggccgattt
aaatatatatcccgcaagggcgccgactataccaaaagttttggtgacagctacgagacc
ggcacattgacacctcatctgcgtccactgctgcccctgggcatggagtctataatactg
gacggcgagatgatgatctgggatacgcagcagctgcgctatcgcgagaagggcgaaaac
acagatgtgaaacatctaaaaccggagcgcagctggcggccctgctttgtggtctatgat
ctgctctatctgaacggggagagcctgctggatatgacgtacgcgcagcgcacctataag
ctgcaggagctgatcagcgaacagcagggcgtgctgcaaataatgaagggacagaaaata
agttccctagagcatttcaatacgctcttccagcagatgcttgactccaatgcggagggc
attgtccttaaaaagcaaaactcaatctataagcccggagtgcgtgtaggcggcggctgg
tacaaggacaaagcggattatatcgagggtcttataaccgagttcgatgtgctcatcatt
ggtggcttttacaatcgcaaacggaccttcattgaatcatttttgctgggcgtgcttaag
cctggcggcgaaacggagcgtgacgaggtgtacagcattggctgtgtggccaataatacg
cgtcagcgcaccgtgctccatcatgagctgaggccacattggcacgatgcgagcacggag
ccaccgccgctgtggtatcactacaagcctaacgaaaaggagggctcacccgacgtttgg
attcagccggagaagtccgtcatattgcaggtgaaggcagcggatttgacacccaatggc
gccttctatacacccaagtcgctgcactttccgcgcacacagctcctgcgcgatgacaag
gtgtggaacgagtgcatgacgctgcaggagtatacagaactgtgtcagggtcagggtgcc
ataaagaaactcaacaagcgtcaggcgaacctaaatgactttaccacggaacgcaagcgt
ataaagttgacgacggccgaacgcaaccgcctcggcttggctgcctatgagaagcgttat
gatgtccagcccttggcgaacagctcacagctgtttgagggcttcagcttttgcatattg
agcggcacacgcggatacagcaaacagcagctacaaacactggccgctgagaacggcggc
accattgtccagaatccattgcccaacgatccgaagtgcatttgcatagccggtgatctt
gtctatttggtggagcgtctgatgcagcaacagccgcgctgcaatgacattttacgcctg
gattggctgctgcgtgtgtcccagaaacagcagatcgagctgcgtcccagagatgtgctg
tcagccaccgatgcgctgcagacgcagttcgacaagagttttgacaagctgggtgatagc
tttacggacctgtttggcagcctgaacgagctacaggaagtgctgctggatataagcgaa
gtgcaattggactctgtgcatgtggatgagcatgatttggacaaactggagcagcaactg
cttggcactgccagttacaacatttttgccaagcaccatgcctgcttttataatcgcgat
gcagatgagctggcgaggctgctctttatccagcgtggcgggcagctagttagcgaaaca
gagcttcagagcattaaccttgtgcttgtatgttccagccgactgaatcggcaggatttt
aagcaatggtatcaggagcatttcactacgcatcccccacaggctactcggttgtcgcct
cccaatgtcaacgccaccctactcactacgcgtaagtacccaacgtatatgttgagcgtg
ttgattgtgccattgtgtgacaatttgttgccacagcgcacgccaacaaattggctgtgg
tccgcgcttttgatgaaggagaatctcatactacccggttatgatttgaaaacacgcttc
aaagtaatggctgtgcgcaagcggctgggacgcggacgcacctcgtcgctggagtccaag
tcgaagccgtccaaggaacgcatcggtctacgcatctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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