KEGG   Desulfovibrio vulgaris DP4: Dvul_0133Help
Entry
Dvul_0133         CDS       T00452                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
dvl  Desulfovibrio vulgaris DP4
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:dvl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Dvul_0133
Enzymes [BR:dvl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Dvul_0133
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Dvul_0133
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(162987..164102)
Genome map
AA seq 371 aa AA seqDB search
MPELPEVETIACGLRPALSGRRIVGVTVHNPGTLEGPLRTPAAFTEAVQGRRIADVGRRG
KLLLVAFASLPPVGHAGQPRPEGLSSSTVRDFLVTHGFHAAGCATSVHACAPLLADGQQT
SGPVPERGRLAGHGDGMDGTSRTGSTLPGTGGTENSDAVAVADDDTVLGLAFHLKMTGRL
FIHPPATPAGIHTRVVFDLEGGTRLFFDDARKFGYVRCITRRSLALWPFWRDLGPEPLET
DARGFAARLARRRGRIKALLLDQKVVAGVGNIYADESLFRAGIRPDTQAHTLIPERLFAL
HGHLQDVLRESIAECGSSIRDYRDAHGDAGAFQNSFRVYGRGGQPCRHCGTTLATAQVAG
RTTVFCPRCQR
NT seq 1116 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactgcctgaagtggaaaccatcgcctgcggcttgcgtccggccctttcaggg
cggcgcatcgtgggtgttacggtgcacaaccccggcacgctggaaggtccgctgcgcaca
cctgccgccttcacggaggccgtgcaggggcgacgcatcgcggatgtgggacggcgcggc
aagctgctgcttgtggcgttcgcgtcattgccacctgtcggccacgcagggcaaccgcga
cctgaaggtctctcctcttccacggttcgcgacttcctcgtcacgcacggcttccatgcc
gcagggtgcgccacgtcagtccatgcctgtgccccccttcttgcggacgggcaacagaca
tccgggcccgtcccggaacggggccgtctcgcggggcacggcgacggcatggatggcaca
tcgcggaccggaagcaccttgcccggaaccggaggcaccgaaaactctgacgctgtagcc
gtagcggatgacgacaccgtcctcggtctcgccttccacctcaagatgaccggacgcctc
ttcatccacccgcccgcaaccccggcgggtatccacacccgcgtggtcttcgaccttgaa
ggcggcactcgcctcttcttcgatgacgcccgcaagttcggctatgtgcgttgcatcacc
cggcgcagccttgcgctgtggcctttctggcgcgacctcggccccgagcccctcgagact
gacgcgcgcggcttcgcggcgcggctcgcccgcaggcgagggcgcatcaaggccctgttg
ctcgaccagaaggtcgtggcgggggttggcaacatctatgccgacgagtcgctgttccgt
gccggcatccgccccgacacgcaggcccataccctgatacctgaacgcctcttcgccctg
cacgggcatcttcaggatgtgctacgcgagtccatcgccgaatgcggcagttccatccgc
gactaccgcgatgcacacggcgatgcgggggccttccagaacagcttcagggtctacggg
cggggcgggcagccttgccgtcactgcggcacgactctcgccacggcgcaggtagcagga
cgcaccacggtcttctgccccagatgccagcggtga

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