KEGG T00452: Dvul

Desulfovibrio vulgaris DP4: Dvul_0736

Entry

Dvul_0736 CDS T00452

Definition

UDP-N-acetylmuramyl-tripeptide synthetases

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

dvl Desulfovibrio vulgaris DP4

Pathway

dvl00300	Lysine biosynthesis
dvl00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:dvl00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:dvl00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase ADH_zinc_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

900694..902154

AA seq 486 aa
MKPEQVTFDTLLGRVAATLPQIRTDSRRVGPGDVFVAVPGVAVDGAAFITQAVAQGATMV
VCRADGLQHLPEAAFAVAVHDDPRAALGALGQARYGTASLPFPVVGVTGTNGKTTITYLL
EHLFASAGRRCGVLGTVSYRWPGHVETAPLTTPDCLQLHEMLGQMAGAGVDVAFMEVSSH
ALDQERVAGIRFAGAVLTNLTQDHLDYHGDMETYFNAKARLFRELPEVSKHCAVNADDPW
GRRLLADLPGAVGFALTGAPVSGTRHLHGEMLRCSTAGVHLRMHFEGRTWEVDSPLVGAH
NASNLLAVQAVGLGLGLSPADFVHLENFTGVPGRLERITNDRGLDVFVDYAHTPDALVNV
LRALRDVGFTRIVTVFGCGGNRDRTKRPLMGAAVAAHADVAVLTSDNPRHEDPLAIMEDV
KPGLAGAREVVAEADRRKAIALALEMLRPGDALLVAGKGHEDYQQVGDRKLPFSDQQTIR
EILGCN

NT seq 1461 nt +upstreamnt +downstreamnt
atgaaacctgaacaagtgacgttcgatacccttctcgggcgcgttgccgcgaccctccca
cagatacggaccgattcgcgcagagtcggtccgggcgacgttttcgtggccgttcccggc
gtcgccgtggacggggccgccttcatcacgcaggcggtggcgcagggggcgaccatggtc
gtgtgccgtgcagacggcctgcaacacctgccggaagccgcctttgccgtggctgtgcat
gacgacccccgcgccgcgctcggtgcgctcgggcaggcgcgttacggcacggcatcgttg
ccctttcccgttgtcggcgtgacaggtacgaacggcaagacgacgataacctacctgctc
gaacatcttttcgcctcggcaggccgccggtgcggcgtgctcggaacggtaagttaccgg
tggcccgggcatgtcgagaccgccccgctgaccactccagactgtctgcaactacacgag
atgcttggccagatggcgggtgcgggtgtggatgtcgccttcatggaagtgtcgtcgcac
gcgcttgatcaggagcgggtcgcgggcatacgtttcgccggggcggtgctcaccaacctc
acgcaagaccacctcgactaccatggcgacatggagacctacttcaacgccaaggcacgc
cttttcagggagttgccggaagtcagcaagcattgtgccgtcaatgccgacgacccctgg
gggcggcgtctgctcgccgacctgccgggtgcagtcggtttcgccctcaccggtgcgccc
gtgtccggaacgaggcacctgcatggtgagatgctgcgctgctcgactgcgggcgttcac
ctgcgcatgcacttcgagggccgcacgtgggaggtcgactctccgctcgtgggcgcacac
aacgcctcgaacctgctggccgttcaggccgtgggtctcgggcttggcctctcgcccgcc
gattttgttcatcttgaaaatttcaccggagttcccggcaggttggagcgtatcaccaac
gaccgggggcttgacgttttcgtcgattacgcccatacgccggacgccctcgtcaacgtg
ctgcgcgcgttgcgcgatgtgggcttcacgcgcatcgtcacggtcttcggctgcggcggc
aaccgcgaccgcaccaaacgccccctcatgggcgctgccgtggccgcacatgccgacgtg
gccgtcctcacgtccgacaacccccgccatgaagacccgctcgccatcatggaagacgtg
aagcccggccttgccggggcgcgtgaggtcgtggcggaggccgacaggcgcaaggccatc
gcccttgcgttggagatgctgcgtcccggagacgcgcttctcgtggcaggcaaggggcat
gaggactatcagcaggtgggcgaccgcaagctgcctttcagcgaccaacagaccatccgg
gagattcttgggtgcaactga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DVL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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