KEGG   Nitratidesulfovibrio vulgaris DP4: Dvul_1969
Entry
Dvul_1969         CDS       T00452                                 
Name
(GenBank) dephospho-CoA kinase / ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
dvl  Nitratidesulfovibrio vulgaris DP4
Brite
KEGG Orthology (KO) [BR:dvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dvl03009]
    Dvul_1969
Enzymes [BR:dvl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Dvul_1969
Ribosome biogenesis [BR:dvl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Dvul_1969
SSDB
Motif
Pfam: PseudoU_synth_2 CoaE S4 AAA_28 AAA_16 ABC_tran S4_2 AAA_22 Viral_helicase1 AAA_18 DAP3 AAA_19 Zeta_toxin MeaB nSTAND3 Gln_amidase
Other DBs
NCBI-ProteinID: ABM28985
UniProt: A0A0H3A8P3
Position
2287105..2288730
AA seq 541 aa
MQNTQTALSGKEQAHSLTVPAGMRNERLDRFLGEALSHTDLSREKIKRAIRDGQCTVDGT
VCTTPSTRLRSGQRVELAIAPAATAVEPEEGDLTIIHRDEHLLVIDKPAGLTVHPCPSCP
EGTLVHRLVHHFDALRAQEGFRPGIVHRIDKDTSGLLLVALSEGVRLKLSEAFAERTVEK
EYLALVHGVPPATGEVDAPIGRHPTHKVRMAVVKGGKPARSEWRVLHAAPEGHYALVAVR
IHSGRTHQIRVHMAHAGFPLWGDQLYGPGTPARLREQGYGARQMLHAWRLAFTHPVTGER
LRFTCPPPQDFPDLAVALARRMTRVVITGSPGCGKSALLHCLQDRGVPTWSADAAVAALY
EPGADGWHCLRGRFGDRFVPDDSAPVDRRALLAAMQTEPGLRREVEQMVHPLVRHDMEAF
YTRHAETGAPVAVAEVPLFLEAGWRSGDGSCDVLAGVACPERERMHRLTEIRGWTPETIA
AMTAWQWPDEDKMRACDMLIDNGGSLEDLSGETGRFIAALDARREAAEARLAEELHDIWK
D
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgcagaacacacagacagccctctccggaaaggagcaggcacacagcctgacggttccc
gccgggatgcgcaacgaacggctcgaccgctttctcggcgaggccctgtcccataccgac
ctttcacgcgaaaagatcaagcgtgccatacgcgacggtcagtgcacggtcgacggcacc
gtctgcaccacccccagtacccggctacgctccggacaaagggtggaactcgccatagcc
cccgccgccacagccgtggagcccgaagagggcgacctgaccatcatccatcgcgacgag
cacctgctggtcatcgacaagcccgccggactcacggtgcacccctgccccagttgcccc
gaaggcacgctggtgcatcgtctggtacaccacttcgacgcgctgcgcgcgcaagaaggg
ttcagacccggcatcgtccaccgcatcgacaaggatacgagcggcctgcttctcgtggca
ttgtccgaaggtgtgcgcctgaagctgagcgaggctttcgccgagcgcaccgtcgaaaag
gaatacctcgccctcgtgcatggcgtgcctcccgccaccggagaggtcgacgcccccatc
gggcgccaccccacccacaaggtgcgcatggcggtggtgaagggcggcaaacccgcccgt
tccgaatggcgcgtgctccatgccgccccggaaggacactacgccctcgtggcggtgcgc
atccattcgggccgcacgcaccagataagagtgcacatggcccacgcgggctttcccctc
tggggcgaccaactctacggccccggcacgccagcccgtctacgcgaacagggctacggc
gcaaggcagatgctgcatgcatggcgtcttgccttcacccaccccgtcaccggggaacgg
ttgcgcttcacctgcccgcccccgcaggacttccccgacctcgctgtcgccctcgcgcgc
cgcatgacacgggtggtgatcacaggctcaccgggttgcggcaagtccgccctgctgcac
tgcctgcaagaccgcggcgttcccacatggagtgccgacgcggcggtggcagccctctat
gaaccgggggccgatggctggcactgcctgcgcggacgcttcggcgacaggttcgtgccc
gacgactccgcacctgtcgaccgcagggccctgcttgccgccatgcagactgaaccgggg
ctgcgccgcgaggtcgaacagatggtgcaccccctcgtcaggcacgacatggaggccttt
tacacacgccatgccgaaacgggcgcacccgtggccgtggcggaagtccccctgttcctc
gaagcaggctggcgaagcggcgacggttcatgcgacgtgctggcaggggtggcctgtcct
gaacgcgaacgcatgcaccgcctgaccgagatacgcggctggacacccgagaccatcgcc
gccatgaccgcgtggcagtggccggacgaggacaagatgcgcgcctgtgacatgctcatc
gacaacggcggttcgctggaagacctgtccggcgagacgggccgtttcatcgccgcactc
gatgcgcgccgcgaagcggcagaagcaagactcgccgaagaactgcacgacatctggaag
gactag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (25)   

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