KEGG T00816: DvMF

Desulfovibrio vulgaris Miyazaki F: DvMF_1246

Entry

DvMF_1246 CDS T00816

Definition

D-alanine--D-alanine ligase (EC:6.3.2.4)

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

dvm Desulfovibrio vulgaris Miyazaki F

Pathway

dvm00473	D-Alanine metabolism
dvm00550	Peptidoglycan biosynthesis
dvm01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:dvm00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:dvm00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_N Dala_Dala_lig_C ATP-grasp_4

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1539988..1541214

AA seq 408 aa
MSNGKIRVAVFFGGRSPEHDVSIVTGLQVIQALDAAQYEPVPVYVDRCGVWRTGEKLLDR
ATYIPARDADGLPAVSLEIAPGKGGMLVEQTSKLFGKPRRIPFDVAIPAFHGPYGEDGDM
QGLFEAVGIPYTGMRVLASAIFMDKAATKQALAGTGIPMLPCAVLRKPVGGLLPPRADIE
AALAGITLPGCLKPAHLGSSIGVAKVDSIEDIEAVLPGLFRNDTVAIVEPYLDGCVEYNI
SVRRDGEGHATSAIERPKRDSELLDFRQKYLSSGGKTGSKTGGMGGTKSAGDSGSAGMLS
LTREINPDLPESLEGRIRDFAVRTYAAFGGTGAPRMDFMYDATRDEVWLNEVNPIPGSFA
FFLWEAAESPIRFTRLLSLMIDEARAMARHTACPEDPTPEAARLFPRR

NT seq 1227 nt +upstreamnt +downstreamnt
atgtccaacggcaaaatccgcgtcgcggtctttttcggcgggcgttcgcccgagcatgac
gtcagcatcgtcaccggcttgcaggtcatccaggccctggacgccgcgcagtacgaaccc
gtgcccgtctacgtggaccgctgcggcgtctggcgcaccggcgaaaagctgctggaccgc
gccacctacatccccgcccgcgacgccgacggcctgcccgccgtgtcgctggaaatcgcc
cccggcaagggcggcatgctggtggagcagacctccaagctgttcggcaagcccaggcgc
attcccttcgacgtggccatccccgccttccacggcccctacggcgaagacggcgacatg
cagggcctgttcgaggccgtcggcattccctacaccggcatgcgcgtgctggcttccgcc
atcttcatggacaaggcggccaccaagcaggcactggccggcaccggcattcccatgttg
ccctgcgcggtgctgcgcaagcccgtgggaggcctgctgcccccgcgcgccgacatcgag
gccgcgctggcgggcatcaccctgcccggctgcctgaagcccgcgcaccttggcagcagc
atcggcgtggccaaggtggattccatcgaggacatcgaagcggtgctgcccggcctgttc
aggaacgacaccgtggccatcgtggagccgtatctggacggctgcgtggagtacaacatt
tcggtgcggcgcgacggcgaagggcacgccacctcggccatcgagcggcccaagcgcgac
agcgaactgctggactttcgccagaagtacctttcgtcgggcggaaagaccggcagcaag
accggcggaatgggcggcaccaagagcgcgggcgattccggcagcgcgggcatgctttcg
ctgacgcgagagatcaaccccgaccttcccgaaagcctggaaggccgcatccgcgacttt
gccgtgcgcacctacgcggcctttggcggcaccggcgcgccacgcatggacttcatgtac
gacgccacccgcgacgaggtgtggctgaacgaggtgaaccccatccccggttcgttcgcg
ttcttcctgtgggaagcggcggaaagcccgatacgcttcacccggctgctctcgctgatg
atcgacgaggcgcgggccatggcccggcacaccgcctgcccggaggatccgacccccgag
gccgcccggctgttcccccgccgatag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-DVM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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