KEGG   Drosophila yakuba: Dyak_GE24522
Entry
Dyak_GE24522      CDS       T01068                                 
Name
(GenBank) uncharacterized protein
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
dya  Drosophila yakuba
Pathway
dya03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dya00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Dyak_GE24522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dya03400]
    Dyak_GE24522
Enzymes [BR:dya01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Dyak_GE24522
DNA repair and recombination proteins [BR:dya03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     Dyak_GE24522
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: EDW97093
FlyBase: FBgn0241636
UniProt: B4PNS8
Position
3R
AA seq 805 aa
MILHRLTWQARFLTRFVCNKMASKGMHHEDNKLDTFRRICDEIAGESSYLKKAEKLQRFF
EKGSSGKGFKGDTLLWVQFLIPEANQRVYNLQNKALIKLFSRILNANQQQMHLDLEQDGD
VSETLRKHFAASRKLKPQVQSKLYLQEVEEMLLKLVERTKEDEQTKLLHELCSKATDLDL
RTFIRLVKHDLRINARARHILDAFGPEAYPAYQSSRDLVAIVRQFAGKENKKDAPSPAKK
AKKTNSSAIQVMTPISPMLASPCKSVEEAFKKSPAGLYSEIKYDGERVQIHKQGNDFKFF
SRNLKPVVDHKIRALKEYIPQAFPGGGEMILDSEIILVDTDTGALLPFGSLGAHKKQTFA
NAAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIEPIKSHVQLSESEFLKTTRELAVMT
ARVLHANLEGVVLKSPSSTYQPGKRNWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGG
TLSIFLMGCYDAFGRLWKTVTKVHSGLDDATNAEVHDSLIKLTERADANAMPSWLLCSKS
LVPDVLAKDPLEMPVWEITGAEFTKSDAHTASGISIRFPRITRRRSDKSTKEATDLAHLE
DLFEASKKNVNVDLLLANCSKDEKPIDIKSTPQKEKNLNGNRSSSSKKLKRCKTGSDDED
EAPARSKHKEAKATRSLSPSQKGLKDFFKPSKELKSVVKKEPKENENAIEPTSSKGKLFE
GLVAHFAMEKDSSKLMQQFTEHGGSCTTDPRKANLVFYNTHETSDLEKLRTLYRRSCRHL
NVRWLQTSLDTQSRQPYPTYAVMMK
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgattttgcacagactaacgtggcaggccaggtttctaactcgctttgtgtgtaataag
atggctagcaaaggaatgcaccatgaggacaacaagttggacaccttccgtcgcatctgc
gatgaaatagccggcgagtcaagttacctgaagaaggcggagaaactgcagcgatttttc
gaaaagggaagcagtggcaagggcttcaagggcgacaccctgctctgggtgcagttcctc
atcccggaggccaaccagcgggtctacaatctgcagaacaaggcgctgatcaaactcttt
tcgcgcattttaaatgcaaaccagcagcaaatgcatctggatctagagcaggatggagac
gtttcggaaacgctgcgcaagcactttgccgcttctaggaaactcaagccacaagtgcaa
agcaagctctatctgcaggaggtggaggagatgctcctaaaactggtggagcgtaccaaa
gaggatgagcagaccaaactgctgcacgagttgtgctcgaaggcaacagacttggatctg
cgcacctttattcgcttggtgaagcacgacttaagaatcaatgcgcgggcccggcacatc
ctggatgcctttggtcctgaagcctaccccgcatatcagtcctcccgcgatttggtggcg
attgtgagacagtttgccggcaaggaaaataaaaaggatgcccctagcccggctaagaaa
gctaaaaaaacgaactcgagtgcgattcaggtaatgacgcccatatcgcccatgttggcc
agtccctgcaagtcggtggaggaggccttcaagaagagtcctgctggactgtatagcgag
atcaaatacgatggagagcgggttcaaatccacaagcagggcaacgatttcaagttcttt
agccgcaatctgaagcctgtggtggatcacaagatacgggctcttaaggagtatataccg
caagcctttcctggcggcggtgaaatgatattggactctgagatcattctagtcgacact
gacacgggagcactgctgccctttggatcgttgggtgcccataaaaagcagactttcgcc
aatgcagcagtatgcttatttgtgtttgattgcatactgtacgatggcgaggatttgacc
cagttgccattccgaaaacgtcgtgagatccttgagcagaatattgaacccattaaatcc
cacgtgcagctgtcggagtcggagttcctaaagaccacgagggaactggccgtgatgacg
gccagggtgttacatgccaatctggagggagtggtcctgaaaagtccatctagcacatat
cagccaggcaaaagaaactggcttaaggttaagaaggattaccttttcgatggaaagatg
gctgacacagccgacttggtagttctgggagcttggtatggatcagggaagaaaggtggc
acgcttagcattttcctcatgggatgctacgatgcgtttggacgtctgtggaagacagtg
accaaagtacactctggattggatgatgctaccaacgcagaggtacatgattcactgatc
aagctaaccgaacgtgctgatgccaacgcaatgcccagttggctattgtgcagtaagtcc
ctggtgccagatgtactggccaaggatccgcttgaaatgccagtatgggagattactggc
gccgagttcacaaagtctgatgcgcataccgcgtctggaatctcgataagatttcccagg
attactcgtcgtcgtagtgataaatcgacaaaagaggccactgatctggcccacttagaa
gatctttttgaagcctcaaaaaagaatgtaaatgttgatttgctgctggccaattgtagt
aaggatgagaaaccaattgatatcaaatcaactccccaaaaagagaaaaatctaaatggc
aatcgatcaagtagtagtaagaaactaaaaaggtgcaaaactggttcagatgatgaagac
gaggctcctgcgcgcagcaaacacaaggaggcaaaagcgacgagaagcttgtcgccttcg
caaaagggattaaaggattttttcaagcccagcaaagagctgaaatcagtagtaaaaaag
gaaccaaaggagaacgaaaacgctattgaaccaactagctcaaaaggcaagctatttgaa
ggattggtggctcactttgccatggaaaaagattccagcaaactgatgcagcagtttacg
gagcatggaggaagctgtacaacggatccgcgaaaagctaatctggttttttataataca
cacgagacatcggacctggagaagctaagaacgctctatcgtcgtagctgccggcacttg
aatgtaaggtggctccaaacctctctcgatactcagagtcgacagccttatcccacatac
gccgtgatgatgaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   FLYBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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