KEGG   Durio zibethinus (durian): 111294057
Entry
111294057         CDS       T05242                                 
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:3.6.4.13 5.6.2.3]
Organism
dzi  Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dzi03009]
    111294057
   03012 Translation factors [BR:dzi03012]
    111294057
Enzymes [BR:dzi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     111294057
Ribosome biogenesis [BR:dzi03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   111294057
Translation factors [BR:dzi03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    111294057
SSDB
Motif
Pfam: AAA_11 AAA_12 SMUBP-2_HCS1_1B AAA_30 AAA_19 Viral_helicase1 AAA_22 DEAD AAA_16 ResIII nSTAND3 PhoH AAA RuvB_N UvrD-helicase AAA_25 UvrD_C_2 PIF1 Zot T2SSE ABC_tran TPK_catalytic AAA_7 IstB_IS21 ATPase AAA_33 AAA_5 Rad17 Glyco_tranf_2_3 DUF2786
Other DBs
NCBI-GeneID: 111294057
NCBI-ProteinID: XP_022742958
UniProt: A0A6P5YR14
Position
Unknown
AA seq 646 aa
MEGQKKKKSSPISLQQFISTMTPLIDLEKNAEISASISSGASRNLDTAQKRGSTILNLKC
VDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSS
IMVAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVLKGPAADLVPVLFGERSP
TVSKKGITFTPFNSNLDRSQKDAILKALSSKDIFLLHGPPGTGKTTTVVEIILQEVKRGS
KILACAASNIAVDNIVERLAPHRVKLVRLGHPARLLPQVLDSALDAKVLRGDNSSLANDI
RKEMKALNGKLLKTKDRNTRRDIQKELRTLSKEERKRQQLAVTDVIKDADVILTTLTGAF
SRKLDNTTFDLVIIDEAAQALEIACWMALLKGSRCILAGDHLQLPPTIQSVEAERKGLGR
TLFERLADLYGDEVMSMLTVQYRMHELIMNWSSKELYDSKIKAHPSVAAHMLFDLENVKR
SSSTEPTLLLVDIAGCDMEEKKDEEESTLNEGEAEVAISHAKKLVQDGVHASDIGIITPY
AAQVVLLKMLKSNGDKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNV
AVTRARRQCCLVCDTETVTSDGFLKRVVEYFEEHGEYLSASEYRNE
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggagggacaaaagaagaagaaatcatctccaatctctctccaacaattcatctccact
atgacccctttaattgatttggagaagaacgcggagatatcagcttctatcagttcagga
gcatcgagaaatttggacactgctcaaaagaggggctccacaatactaaatttgaagtgt
gttgatgctcagacagggctaatggggaaaacactacttgagttccaatccaccaaaggg
gatgttcttcccgctcacaagtttggaacccatgatgtagttgttctaaaaccaaacaag
gctgatttaggttctcctgctcttggacaaggtgtagtttaccggttgaaggattcctca
atcatggttgcttttgatgacatcccagaagatggtttaaacagtcccttgcgtctagaa
aaagtggcaaatgaggtgacatatcgaagaatgaaggatgccttgatacaattgagtaaa
ggtgtgctgaagggaccagctgcagatctagttcctgtattgtttggagagagatcacca
acagtatcaaagaagggtatcacattcaccccctttaactccaaccttgatcgttctcag
aaagatgccatcttaaaggcactgtcatcaaaggatatatttctgctgcatgggcctcct
ggaactggaaaaactacaacagttgtggaaattatcttacaagaagtgaagcgaggatca
aagatccttgcttgtgctgcttcaaatattgctgttgacaacattgttgagcgacttgct
cctcacagagtaaagctggtgagattggggcatcctgcacgtttactacctcaagttttg
gacagtgcacttgatgcaaaggttctacgaggagataatagctctcttgcaaatgacatt
cgaaaagaaatgaaggcactaaatgggaaattgttgaaaaccaaagacagaaatacaagg
agagatatccagaaggagcttaggactctttccaaagaagagcgtaaaaggcagcagctt
gctgtgaccgatgtaattaaggatgctgatgtcatattgacaactttgactggtgcattt
tctcgcaaactagacaacactacatttgatttggttattattgatgaagctgctcaggca
cttgaaatagcctgctggatggctctactaaagggttcaagatgtatacttgcaggggac
catctgcagcttcctccaactatccagagtgttgaagctgagaggaaagggttaggaaga
accctctttgaacgccttgcagatctgtatggagatgaagtcatgtccatgctcactgtc
cagtaccgcatgcatgagcttattatgaactggtcatccaaagagctttacgacagcaag
atcaaagcccatccaagtgttgctgcacacatgctctttgatcttgagaatgttaagagg
tcatcttcaacagaaccaacacttcttctcgtagacatagctgggtgtgatatggaagag
aagaaggatgaggaagagagcacgttgaatgagggtgaagctgaggttgctatttcacat
gccaagaaacttgttcaggatggagtccatgcttctgatatcggaattattaccccttat
gctgcacaggtggtcttactgaagatgttgaaaagcaatggagataagctaaaggatctg
gaaatctcaaccgttgatggtttccaaggtcgggagaaggaagcaattattatttcaatg
gttcgatcgaactcaaagaaagaggttgggtttttaagtgaccatagacgaatgaatgtg
gctgtgacacgagcaagaagacagtgttgtcttgtatgtgacactgaaacagttaccagc
gatggattcttaaagcgggtggttgagtattttgaggagcatggtgagtatctaagtgcc
tctgagtacagaaatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (30)   
   Pfam (30)   
All databases (50)   

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