KEGG   Escherichia coli ABU 83972: ECABU_c09940
Entry
ECABU_c09940      CDS       T01995                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
eab  Escherichia coli ABU 83972
Brite
KEGG Orthology (KO) [BR:eab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eab03400]
    ECABU_c09940 (helD)
Enzymes [BR:eab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ECABU_c09940 (helD)
DNA repair and recombination proteins [BR:eab03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ECABU_c09940 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 Viral_helicase1 DEAD Myb_Cef
Other DBs
NCBI-ProteinID: ADN45569
Position
1042991..1045138
AA seq 715 aa
MGGNCNVFLGWSTFSLTVTLIRNNFVWIYRVMELKATTLGKRLAQHPYDRAVILNAGIKV
SGDRHEYLIPFNQLLAIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWR
RWSGEMSEIASGVLRQQLDLIATRTGENKWLTREQTSGMRQQIRQALSALPLPVNRLEEF
DNCREAWRKCQAWLKDIEGARLQHNQAYTEAMLIEYADFFRQVESSPLNPAQARAVVNGE
HSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTED
ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWL
TEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRI
KLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAAL
LAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGDRCDLDTTYRFNSRIG
EVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESHLDALLDKLSGYAKPEERILILARY
HHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEA
LLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVARKP
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgggcggcaattgtaacgtttttttgggctggagcacgttttctctgacggttacactg
ataagaaataatttcgtgtggatctacagagtcatggaactgaaagcgacaacgcttgga
aaacgtctggcacagcacccttacgatcgggcggtgatcctcaatgccgggattaaagtc
tccggcgatcgccacgaataccttattcctttcaatcaattactggcgattcactgtaag
cgcggtctggtatggggcgaactggagtttgtactgccggacgaaaaagtggtgcgtctg
cacggtaccgaatggggcgagacgcagcgtttttaccatcatcttgatgctcactggcgg
cggtggagtggcgagatgagcgaaattgcgtctggcgttttacgtcagcaactggatttg
attgccacgcgcaccggagaaaataaatggctgacgcgtgagcaaacctctggtatgcgg
caacaaatccgccaggctttgtcggcgttaccattgccggttaaccgactggaagaattc
gataactgccgtgaggcgtggcgtaaatgtcaggcctggttgaaagacattgaaggcgct
cggttgcagcataatcaggcgtataccgaagccatgcttatcgagtatgcggattttttc
cgccaggtcgagtcttcaccgctgaatccggcgcaggcccgggcagtcgttaatggcgag
cattctttgttagtgctggctggtgcaggaagcggaaaaacgtcggtgctggtggcccgt
gcaggctggttgctggcgcgtggtgaagcgtcccctgagcaaattttattgctggcgttt
ggtcgcaaagccgctgaagagatggacgagcgtattcgagaacgactacataccgaagac
attaccgcacgcacgtttcatgcgctggcgctgcatattattcagcagggcagcaaaaaa
gttccgatagtcagcaaactggaaaatgataccgctgcccgtcatgaactttttattgct
gagtggcgcaagcaatgcagcgaaaagaaagcgcaggcgaagggctggcggcaatggctg
acggaagaaatgcagtggtcagtgccagaaggtaatttctgggatgatgaaaaattacag
cgtcgtcttgcctctcgcctcgatcgctgggtaagtctgatgcggatgcacggtggtgca
caggcagaaatgattgccagtgcacccgaagagattcgcgatctgttcagtaaacgtatc
aagttgatggccccgttattaaaagcctggaaaggtgcgctgaaggcagaaaacgctgtc
gatttttcgggccttattcaccaggcgattgtgattctggagaaaggtcgctttatcagc
ccgtggaagcatattctggttgatgaatttcaggatatctcgccgcagcgcgcagcgttg
ttagcggcattacgcaagcaaaacagtcagacgacgttgttcgccgttggtgatgactgg
caggcgatttatcgcttcagcggtgcgcaaatgtcgctcaccaccgctttccatgaaaac
tttggtgaaggtgatcgctgcgatttagacacgacttaccgttttaacagtcgtatcggt
gaggtggcaaaccggtttattcagcagaacccaggccagctgaaaaagccgctaaacagc
ttaaccaatggagacaaaaaagccgtcacgttattggatgagagccatcttgacgctttg
ctggataagctctctggttatgccaaaccggaagagcgcattctgatcctggcgcgttac
catcacatgaggcctgccagcctggaaaaagcggcaacacgctggccgaagttgcaaatc
gactttatgaccattcatgccagcaaagggcaacaggcggattacgtcatcatcgttggc
ttgcaggaggggagtgatggttttccggctgcggcgcgggagtcgattatggaagaggcg
ctactgccaccggttgaggatttcccggacgctgaagaacggcggttaatgtacgtggcg
ctgacccgggcacgccatcgggtatgggcactgtttaacaaagagaatccctctccattt
gtcgaaatactgaaaaatctggatgtgccggtggcgagaaaaccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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