KEGG   Escherichia albertii: EAKF1_ch2772
Entry
EAKF1_ch2772      CDS       T03986                                 
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
eal  Escherichia albertii
Pathway
eal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EAKF1_ch2772 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eal03019]
    EAKF1_ch2772 (pnp)
   03016 Transfer RNA biogenesis [BR:eal03016]
    EAKF1_ch2772 (pnp)
Enzymes [BR:eal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     EAKF1_ch2772 (pnp)
Messenger RNA biogenesis [BR:eal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EAKF1_ch2772 (pnp)
Transfer RNA biogenesis [BR:eal03016]
 Prokaryotic type
  tRNA degradation factors
   EAKF1_ch2772 (pnp)
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 S1_2 KH_2 DUF2110 aRib SLS1_KH2 DUF5813
Other DBs
NCBI-ProteinID: AHE60639
Position
2920209..2922344
AA seq 711 aa
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNE
ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDETLDENELGEILHAI
EKKVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKHAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMNQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPVAEQGE
NT seq 2136 nt   +upstreamnt  +downstreamnt
ttgcttaatccgatcgttcgtaaattccagtacggccaacataccgtcactctggaaacc
ggcatgatggctcgtcaggctactgccgctgttatggttagcatggatgacaccgctgta
tttgttaccgttgtcggccagaaaaaagccaaaccaggtcaggacttcttccctctgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggtagcttcttccgtcgt
gaaggccgcccaagcgaaggcgaaacgctgattgcgcgtctgattgaccgcccgattcgc
ccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgccaccgtggtttctgtt
aacccgcaggttaacccggatatcgttgcgatgattggcgcttctgctgcgctgtctctg
tctggtattccgttcaatggtccgattggtgctgcccgcgtaggttacatcaatgaccag
tatgtactgaacccgactcaggacgagctgaaagagagcaaactggacttggttgttgcc
ggtactgaagccgctgtgctgatggttgaatctgaagctgaactgctgagcgaagaccag
atgctgggtgcggttgtgttcggtcatgaacaacagcaggttgttattcagaacatcaat
gaactggtgaaagaagcgggtaaaccgcgttgggattggcagccagagccggtaaacgaa
gcgctgaacgcgcgcgttgctgcactggctgaagctcgcttgagcgatgcttaccgtatc
accgataaacaagagcgctatgcacaggttgatgtcatcaaatctgaaaccattgcgaca
ctgcttgctgaagacgaaaccctggacgaaaacgaactgggtgaaattttgcacgccatt
gagaaaaaagttgttcgtagccgcgtactggcaggtgaaccgcgtatcgatggtcgtgaa
aaagacatgatccgtggtctggatgtgcgcactggcgtgctgccgcgtactcacggttct
gcgctgttcacccgcggtgaaacgcaggcactggttaccgcaacgctgggtactgcacgt
gacgcacaggttcttgatgaactgatgggcgaacgtaccgacaccttcctgttccactac
aacttccctccgtactccgtaggtgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaaacgcggtgtgctggccgtcatgccggatatggacaaa
ttcccgtacaccgtacgtgtagtgtctgaaattaccgaatccaacggttcttcttctatg
gcttctgtgtgcggcgcgtctctggcgctgatggacgcaggcgtgccgatcaaagctgct
gttgcgggtatcgcaatgggcctggtgaaagaaggcgataactacgttgtactgtctgac
attctgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggttctcgcgac
ggtatctctgcattgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcag
gttgcgctgaaccaggctaaaggtgcgcgtctgcatatcctgggcgtaatggaacaggcg
atcaacgcgccgcgcggcgatatctctgagtttgctccgcgtatccataccattaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgcgccctgacc
gaagaaacgggcaccactatcgaaatcgaagatgatggtactgtgaagattgcagcgacc
gacggcgaaaaagcgaaacacgcgattcgtcgtatcgaagagatcactgcggaaatcgaa
gtgggccgcgtctacaatggtaaagtgacccgtatcgttgactttggcgcatttgttgcc
atcggcggcggtaaagaaggtctggtacacatttctcaaatcgccgacaaacgtgttgag
aaagtgaccgattacctgcagatgaatcaggaagtaccggttaaagttctggaagttgat
cgccagggccgtatccgtctgagcattaaagaagcgactgagcagtctcaacctgctgcg
gcaccggaagctccggttgctgaacagggcgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (21)   

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