KEGG   Escherichia coli BL21-Gold(DE3)pLysS AG: ECBD_3474
Entry
ECBD_3474         CDS       T00939                                 
Name
(GenBank) transcriptional regulator, TraR/DksA family
  KO
K06204  RNA polymerase-binding transcription factor
Organism
ebd  Escherichia coli BL21-Gold(DE3)pLysS AG
Pathway
ebd02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:ebd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    ECBD_3474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ebd03000]
    ECBD_3474
   03021 Transcription machinery [BR:ebd03021]
    ECBD_3474
   03009 Ribosome biogenesis [BR:ebd03009]
    ECBD_3474
Transcription factors [BR:ebd03000]
 Prokaryotic type
  Other transcription factors
   Others
    ECBD_3474
Transcription machinery [BR:ebd03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     ECBD_3474
Ribosome biogenesis [BR:ebd03009]
 Prokaryotic type
  rRNA transcription factors
   ECBD_3474
SSDB
Motif
Pfam: DksA_CC zf-dskA_traR
Other DBs
NCBI-ProteinID: ACT30473
UniProt: A0A140NDZ7
Position
3620266..3620721
AA seq 151 aa
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT
HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE
IGIRRLEARPTADLCIDCKTLAEIREKQMAG
NT seq 456 nt   +upstreamnt  +downstreamnt
atgcaagaagggcaaaaccgtaaaacatcgtccctgagtattctcgccatcgctggggtg
gaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttc
cgtcgtattctggaagcatggcgtaatcaactcagggatgaagtcgatcgcaccgttaca
catatgcaggatgaagcagccaacttcccggacccggtagaccgtgcagcccaagaagaa
gagttcagcctcgaactgcgtaaccgcgatcgcgagcgtaagctgatcaaaaagatcgag
aagacgctgaaaaaagtggaagacgaagatttcggctactgcgaatcctgcggtgttgaa
attggtattcgccgtctggaagcgcgcccgacagccgatctgtgcatcgactgcaaaacg
ctggctgaaattcgcgaaaaacagatggctggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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