KEGG   Enterobacteriaceae bacterium FGI 57: D782_4286
Entry
D782_4286         CDS       T02431                                 
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ebf  Enterobacteriaceae bacterium FGI 57
Pathway
ebf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ebf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    D782_4286
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ebf03021]
    D782_4286
   03400 DNA repair and recombination proteins [BR:ebf03400]
    D782_4286
Enzymes [BR:ebf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     D782_4286
Transcription machinery [BR:ebf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     D782_4286
DNA repair and recombination proteins [BR:ebf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      D782_4286
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-ProteinID: AGB80169
UniProt: L0M8A8
Position
complement(4488582..4492610)
AA seq 1342 aa
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVASKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKEDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRSDKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVDRG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNSVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGADVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKESEIKELLQ
LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gtactggatgtgccttatctcctttctatccagcttgactcgtttcagaagttcatcgag
caagatcctgaagggcagtatggtctggaagcagccttccgttccgtattcccgattcag
agctacagcggtaattccgagctgcaatacgtcagctaccgccttggcgaaccggtgttt
gacgtccaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtaaaagacattaaagaacaa
gaagtctacatgggcgaaattccgctcatgacggacaacggtacctttgttatcaacggt
actgagcgtgttatcgtttctcagctgcaccgtagtccgggcgtcttctttgactccgac
aaaggtaaaacccactcttcgggtaaagtgctgtataacgcgcgcatcattccttaccgt
ggttcctggctggacttcgaattcgatccgaaggacaacctgttcgtacgtattgaccgt
cgccgtaaactgcctgcgaccatcattctgcgtgcgctgaattacaccactgagcagatc
cttgacctgttctttgagaaagttgttttcgaaattcgcgacaacaagctgcagatggaa
ctggtgccggaacgcctgcgtggtgaaaccgcatcctttgacatcgaagctaacggtaaa
gtgtacgttgagaaaggccgccgtattactgcgcgccacattcgtcagctggaaaaagac
gatatcaaacatatcgaagttccggttgagtacattgctggcaaagttgcgtctaaagac
tacgttgacgaatctactggcgagctgatctgcccggctaacatggagctgagcctggat
cttctggctaagctgagccagtctggccacaaacgtatcgaaacgctgttcaccaacgat
ctggaccacggtccgtacatctctgagactgtacgcgtcgacccaaccaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgcccgggtgagccgccgactcgtgaagca
gctgaaagcctgtttgagaacctgttcttctccgaagaccgctatgacctgtctgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagaagacatcatcgaagtgatgaaaaagctcattgatatccgtaacggtaaaggc
gaagtcgatgatatcgaccacctcggcaaccgtcgtatccgttccgttggcgaaatggcg
gaaaaccagttccgcgttggcctggtacgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaaaccgatttctgca
gcagtgaaagagttcttcggttccagccagctgtctcagtttatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctccgcactcggcccaggcggtctgacccgt
gaacgcgcaggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccgaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatatggcttcctcgagacgccgtatcgtaaagtgaccgacggtgtggtaact
gatgaaattcattacctgtccgctatcgaagaaggcaactacgttattgctcaggcgaac
tccaacctggacgatgaaggccacttcgtagaagacctggtaacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccacccaacaggtg
gtatctgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcggttccgaccctgcgctctgataagccgctggtt
ggtaccggtatggaacgtgctgttgcggttgactccggtgttactgcagttgctaagcgt
ggcggtaccgtccagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgag
atgtacccgggcgaagcaggtatcgacatctataacctgaccaaatacacccgctctaac
cagaacacctgtatcaaccagatgccttgcgtatctctgggtgagccggttgatcgtggt
gatgtgctggctgatggcccgtccaccgaccttggtgaactggcgctgggtcagaacatg
cgcgtggcattcatgccatggaacggttacaacttcgaagactccatcctcgtatccgag
cgtgttgttcaggaagaccgtttcactaccatccacattcaggaactggcatgtgtgtct
cgtgacaccaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtatacatcggtgcagaagtgaccggtggc
gacattctggttggtaaggtaacgccgaaaggtgaaacccagctgaccccagaagagaag
ctgctgcgtgcgatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgtg
ccgaacagcgtgtctggtaccgttatcgacgttcaggtctttacccgcgatggcgtggaa
aaagacaaacgtgcgctggaaatcgaagaaatgcagctcaaacaggcgaagaaagacctg
tctgaagaactgcagatcctcgaagctggcctgtttagccgtatttacgctgtgctggtt
gccggtggcgttgaagctgagaagctcgacaaactgcctcgcgatcgctggctggaactc
ggcctgaccgacgaagagaaacaaaatcagctggaacagctggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcaaggcgac
gatctggcaccgggcgtgctgaaaatcgtcaaggtatacctggccgttaaacgccgtatc
cagcctggtgacaaaatggcaggtcgtcacggtaacaagggtgtaatttctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcctcgaaacccacctgggtatggct
gcgaaaggtatcggcgataagatcaacgccatgctgaaacagcagcaggaagtcgcgaaa
ctgcgcgaattcatccagcgtgcgtacgatctgggcgccgacgttcgtcagaaagttgac
ctgaacaccttcagcgatgaagaagttctgcgtctggcagagaacctgcgtaaaggtatg
ccgatcgcaacgccggtcttcgacggtgcgaaagagtctgaaatcaaagagctgttgcag
ctgggtggcctgccgacttccggtcagatcacactgttcgacggccgtacgggtgagcag
ttcgagcgtcaggtaaccgttggttacatgtacatgctgaaactgaaccacctggttgac
gacaaaatgcatgcgcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tatggcgcggcatacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaatggc
cgtactaagatgtataaaaacatcgtagacggtaaccatcagatggaaccgggcatgccg
gaatccttcaacgtactgttgaaagagatccgttcgctgggtatcaacatcgagctggaa
gacgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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