KEGG   Erwinia billingiae: EbC_01930
Entry
EbC_01930         CDS       T01270                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
ebi  Erwinia billingiae
Pathway
ebi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ebi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EbC_01930 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ebi03019]
    EbC_01930 (rhlB)
Enzymes [BR:ebi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EbC_01930 (rhlB)
Messenger RNA biogenesis [BR:ebi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EbC_01930 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 CCDC138_C
Other DBs
NCBI-ProteinID: CAX57724
UniProt: D8MKR8
Position
complement(219312..220604)
AA seq 430 aa
MSKTHLTEQKFSDFALHPQVIEALETKGFHNCTPIQALALPFTLSGRDVAGQAQTGTGKT
MAFLTSTFHHLLSNPAPEGRQVNQPRALILAPTRELAVQIHADAEPLTQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMFDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSFRVRELAFENMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGDVDILVATDVAARGLHIPAVTHVFNYDLPDDREDYVHRIGRTGRAGANGHSISLA
CEEYALNLPAIEEYIGHSITVSRYNSDALMTELPPPKRLTRHRSGNGPRRGGNNNRRSSA
PRNNNRKRSG
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttaaccgaacagaagttttccgacttcgccctgcaccctcaggtg
attgaagcccttgaaactaaaggctttcataactgcacgccgattcaggcgctggcattg
cctttcacgctctcagggcgtgatgtagcgggacaggcgcaaaccggtaccggaaaaacg
atggcgttcctgacgtcaacgttccatcatcttctttctaaccctgcgccagaaggccgt
caggtgaatcagccacgtgcgctgatcctggcccctacgcgcgaattagccgtacagatc
catgccgatgctgaaccgctgacgcaggcaaccggtctcaagcttgggcttgcttatggc
ggtgacggctacgataagcagctgaaagtgctggaaagcggtgtcgatattttaatcggc
accacgggccgactgattgactataccaagcaaaatcacgttaacctcggcgccattcag
gtggttgtgctcgatgaagcggatcgcatgttcgatctcggctttattaaagatattcgt
tggctgttccgccggatgcctgcggcaaatcagcgtctgaacatgctgttctccgcgacc
ctctctttccgtgttcgcgaactggcgttcgaaaacatgaacaacgcggaatatgtggaa
gtggaacccgagcagaaaaccggccaccgcatcaaagaagaacttttctatccttctaat
gaagagaagatgcgcctgctgcaaaccttgctggaagaagagtggccagatcgtgccatt
atcttcgcgaacaccaagcaccgttgtgaagatgtctggggccacctggcagcagatgga
caccgtgttgggctgttgaccggcgatgtggcacagaagaaacgtctgcgtattttggat
gacttcactaaaggtgatgttgatatcctggtcgccaccgacgttgccgcgcgtggcctg
catatccctgcggtaacccacgtgttcaactatgacctgccggatgaccgtgaagactac
gtgcaccgtattggtcgtaccggacgcgctggcgccaatggacattctatcagcctggcg
tgtgaagagtacgcgctgaatctgcctgctatcgaagagtatattggccacagcattacc
gtgagccgctataacagtgatgcgctgatgactgaactgccgccaccgaagcgtttaaca
cgtcatcgttctggcaatggtccacgtcgtggcggcaacaacaatcgccgcagcagtgca
ccacgcaacaataaccgtaaacgttcaggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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