KEGG   Escherichia coli B REL606: ECB_02838
Entry
ECB_02838         CDS       T00944                                 
Name
(GenBank) GspD, hypothetical type II secretion protein
  KO
K02453  general secretion pathway protein D
Organism
ebr  Escherichia coli B REL606
Pathway
ebr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ebr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ECB_02838
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ebr02044]
    ECB_02838
Secretion system [BR:ebr02044]
 Type II secretion system
  General secretion pathway protein
   ECB_02838
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 LUD_dom
Other DBs
NCBI-ProteinID: ACT40488
Position
complement(3036934..3038994)
AA seq 686 aa
MFWRDITLSVWRKKTTGLKTKKRLLPLVLAAALCSSPVWAEEATFTANFKDTDLKSFIET
VGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNLLEAQGYAVVPMENDVLKVVKS
SAAKVEPLPLVGEGSDNYAGDEMVTKVVPVRNVSVRELAPILRQMIDSAGSGNVVNYDPS
NVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIPLDNASASEIARVLESLTKNSGENQPA
TLKSQIVADERTNSVIVSGDPATRDKMRRLIRRLDSEMERSGNSQVFYLKYSKAEDLVDV
LKQVSGTLTAAKEEAEGTVGSGREVVSIAASKHSNALIVTAPQDIMQSLQSVIEQLDIRR
AQVHVEALIVEVAEGSNINFGVQWASKDAGLMQFANGTQIPIGTLGAAISQAKPQKGSTV
ISENGATTINPDTNGDLSTLAQLLSGFSGTAVGVVKGDWMALVQAVKNDSSSNVLSTPSI
TTLDNQEAFFMVGQDVPVLTGSTVGSNNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVI
EQEVSKVEGQTSLDVVFGERKLKTTVLANDGELIVLGGLMDDQAGESVAKVPLLGDIPLI
GNLFKSTADKKEKRNLMVFIRPTILRDGMAADGVSQRKYNYMRAEQIYRDEQGLSLMPHT
AQPVLPAQNQALPPEVRAFLNAGRTR
NT seq 2061 nt   +upstreamnt  +downstreamnt
gtgttttggcgtgatattacgttgtcggtctggcgtaagaagacaactggcctcaaaaca
aaaaagcgtttactgccgctggtgctggcagcggcattatgcagttcaccggtttgggcg
gaagaagccactttcaccgccaattttaaagataccgacctgaaatcgttcatcgaaacc
gtcggcgctaaccttaataaaaccatcattatggggccgggcgtacaggggaaagtgagt
attcgtaccatgactccgctcaatgaacgccagtattaccagctattccttaacctgctg
gaagcacaggggtatgccgtcgtaccgatggaaaacgacgtgctgaaggtggtgaaatcc
agcgccgcgaaagtcgagccactgccgctggtcggtgaaggcagcgacaactacgcgggc
gatgaaatggtcaccaaagtagtgccggtacgtaatgtgtcggtccgcgaattggcaccg
attctgcgccagatgatcgacagcgcaggctcaggcaacgttgttaattacgatccctcc
aacgtgattatgctcaccggacgcgcctccgttgtggagcgcctgacggaagtgatccag
cgtgtggatcacgcgggtaatcgcactgaagaggtgatcccgctggataacgcctcggct
tcggaaatcgcccgcgtgctggaaagcctgaccaaaaacagcggcgagaaccagccagca
acgctgaaatctcaaattgtcgccgatgaacgcaccaacagcgtgattgtcagtggtgac
cccgccacgcgggacaaaatgcgccgtctgatccgtcgcctggactcagaaatggagcgc
agcggcaacagccaggttttctatctcaaatacagcaaagccgaagatctggtcgatgta
ctgaagcaggtcagcggtacgctcacggcggctaaagaagaggcggaaggcacggtcggt
agcgggcgtgaggttgtctccatcgccgccagcaaacacagtaatgccctgattgttacc
gcgccgcaggacatcatgcagtcgctgcaaagcgtgattgaacaactggatattcgccgt
gctcaggtgcatgtcgaggcgttgatcgtggaagttgctgaaggcagcaatatcaacttc
ggcgtgcagtgggcgtcgaaagatgccggattaatgcagtttgctaacggtacgcagatc
cctattggcacgctgggggcagccatttctcaggcgaaaccgcagaaaggctcgacggta
atcagtgaaaacggcgctaccaccataaatccggatactaacggcgatctctccacgctt
gctcagcttctttccggctttagcggtacggcggttggtgtggtgaaaggcgactggatg
gcgctggtgcaggcggttaaaaacgactccagctctaacgtgctctccacgccgagcatc
accacgctggacaaccaggaagccttcttcatggtgggccaggacgttccggtattaact
ggatctaccgttggctccaataacagcaatcctttcaatacggtagagaggaaaaaagtc
ggcatcatgctgaaagtcacgccgcagattaacgaaggaaacgcggtacagatggtgatt
gagcaggaagtctcgaaggtggaaggacagaccagcctcgacgtcgtgtttggtgagcgc
aaactgaagaccaccgtgctggctaacgatggcgagctgattgtgcttggcggtctgatg
gatgatcaggcaggagaaagcgtggcgaaagtgccgctgctgggcgatatcccgttgatt
ggtaacctgtttaaatcgacggcggataaaaaagaaaaacgtaacctgatggtgtttatc
cgcccgaccattctgcgtgacggtatggcggcagacggcgtgtcgcagcgcaaatataac
tacatgcgcgccgagcaaatctaccgcgatgagcaaggcttaagcctgatgccgcacacc
gcgcagccggtactgccagcgcaaaaccaggccttaccgccggaagttcgcgcattcctc
aatgccgggagaacgcgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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