KEGG   Shimwellia blattae: EBL_c34850
Entry
EBL_c34850        CDS       T02111                                 
Symbol
yjgR
Name
(GenBank) protein yjgR
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
ebt  Shimwellia blattae
Brite
KEGG Orthology (KO) [BR:ebt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ebt03400]
    EBL_c34850 (yjgR)
DNA repair and recombination proteins [BR:ebt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     EBL_c34850 (yjgR)
SSDB
Motif
Pfam: HerA_C DUF87 TrwB_AAD_bind AAA_10 AAA_22 ResIII FtsK_SpoIIIE SLFN-g3_helicase AAA_30 AAA_16 AAA T2SSE AAA_19 AAA_7 Zot P-loop_TraG SRP54 AAA_28 CbiA
Other DBs
NCBI-ProteinID: AFJ48540
UniProt: I2BDD6
Position
3604567..3606066
AA seq 499 aa
MTDSLLIARTADKTLNLLPHMANRHGLITGATGTGKTVTLQKMAESFSEIGVPVFMADVK
GDLTGIAENGTASEKLLARLKNIGVTDWQPHSNPVVLWDIFGEKGHPVRATVSDLGPLLL
ARLLNLNDIQTGVLNIIFRVADEQGLLLLDFKDLRALTQYVGDNAKAFQSQYGNISPASV
GAIQRALLALEQEGAGHFFGEPMLDIRDWMKTDASGKGVVNILSAEKLYQMPKLYATTLL
WMLSELYEQLPEAGDLDKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKAVGVYFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEQAIQALGTGE
ALISFLDEKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPLYGKYEDAVDRESAFEM
LQKGVQAAPQQQNAPEAGKGVNVDDGILGDLKDILFGTTGPRGGKHDGMVQTMAKSAARQ
LTNQIVRGVLGSLLGGRKR
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgaccgattcgctgctgattgcccgcactgcggacaaaaccctgaacctgctgccccat
atggctaaccgccacgggctgatcaccggcgccaccgggaccggtaaaaccgtcaccctg
caaaaaatggccgaatccttttctgagataggcgtaccggtctttatggcggacgtaaaa
ggcgatctgaccgggattgccgaaaatggcaccgcgtcagaaaagctgctggcccggtta
aaaaacatcggcgttactgactggcagccccacagtaacccggtcgtgctgtgggatatt
ttcggtgagaaaggccacccggtgcgcgccaccgtgtccgatctcggcccgctgctgctg
gcccgcctgctgaacctgaacgacatccagaccggggtgctgaatatcatcttccgggtg
gcggatgagcagggcctgctactgctggacttcaaagatctgcgggcgctcacccagtat
gtgggagataacgcgaaagccttccagagccagtatggcaacatcagcccggcttctgta
ggggcgattcagcgtgccctgctggcgctggagcaggaaggcgccgggcacttctttggc
gagccgatgctggatatccgtgactggatgaagaccgatgccagcggcaaaggggtggtg
aatatcctctctgccgagaagctctaccagatgccaaaactgtacgccaccacccttttg
tggatgctctcggagctctatgagcagctgccggaagctggcgatctggataagccaaag
ctggtcttcttcttcgatgaagcccacctgctgtttaacgatgccccccaggtactgctg
gataagatagaacaggtgatccgcctaatccgctccaaagcggtgggggtgtactttgtc
agccagaacccgtcagacattccggacaacgtactcggccagttaggtaaccgggtgcag
cacgccctgcgcgccttcacccccaaagatcagaaagcggtaaaagccgccgcccagacc
atgcgcgcaaatccggcatttgatacggagcaggccattcaggctctgggaacgggggaa
gcgctgatctccttcctggatgaaaaaggcagcccgtcggtcgtggagcgcgcaatggtg
atcgcgccgtgctcccgtatggggccagtgaccgaagatgagcgtaacggcctgatcaac
cactccccactctacgggaaatatgaagatgcggtggatcgggagtcggcatttgaaatg
ctgcaaaaaggtgttcaggccgccccgcagcagcagaatgcgccggaagccggtaaaggt
gtcaatgtggacgacggtatcctgggcgatctgaaggatatcctgttcggcaccaccggc
ccacggggaggcaagcacgatggcatggtccagaccatggccaaaagcgccgcccgccag
ctgaccaatcagattgtgcgtggggtgctcggcagcctgctgggcgggcgcaagcgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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