KEGG   Pectobacterium atrosepticum SCRI1043: ECA1803
Entry
ECA1803           CDS       T00186                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
eca  Pectobacterium atrosepticum SCRI1043
Pathway
eca03030  DNA replication
eca03430  Mismatch repair
eca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:eca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ECA1803 (holB)
   03430 Mismatch repair
    ECA1803 (holB)
   03440 Homologous recombination
    ECA1803 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eca03032]
    ECA1803 (holB)
   03400 DNA repair and recombination proteins [BR:eca03400]
    ECA1803 (holB)
Enzymes [BR:eca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ECA1803 (holB)
DNA replication proteins [BR:eca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ECA1803 (holB)
DNA repair and recombination proteins [BR:eca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ECA1803 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C HolB_lid
Other DBs
NCBI-ProteinID: CAG74708
UniProt: Q6D682
Position
2049102..2050112
AA seq 336 aa
MDWYPWLNASYRQLISQYQAGRGHHAVLLHALPGMGDESLIYALSRWLICKRPDGMKSCG
QCHSCNLMTAGTHPDWHVLSPEKGKHSLGVDPVRDVVEKVYQHSRQGGAKVIWLASAEQL
TEAAANALLKTLEEPPQNTFFLLGCREPARLLATLRSRCLYHYLDVPNETQSILWLNTRH
RHDSKALRTALRLQSGAPLAAEALLQPERWKQRSVLCQTFSAAMTSRDQFSLIAQLNHDD
ADARIHWLAALLLDAMKWQQGAREHLVNQDQIELVERLALEPSAHLQYELQQWLACRQKL
LTVTGVNRELLLTERLLDGERTLASSVKRDSHPFSV
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggattggtatccgtggctgaatgcctcttatcggcagcttatcagtcaatatcaggca
ggcagaggccaccatgcggtgttgctgcatgcgctgccgggcatgggtgatgaatcgctt
atttatgcgctgagtcgctggctaatctgcaagcgacctgacggaatgaaaagctgcggc
cagtgccattcttgtaatttgatgactgcgggaacgcacccagattggcatgtgctgagc
ccggagaaaggcaagcacagtctgggtgtcgatccggtgcgtgacgtcgtggaaaaagta
taccaacactcccgacagggcggagcaaaagtgatctggctggcttccgctgagcaactg
acagaagccgcagcgaacgcactgctgaaaacgctggaagaacccccacaaaataccttc
tttttattgggttgccgtgagccggctcggttgttagcaaccttacgcagtcgttgcctg
tatcactatctggatgtgccgaatgagacgcagagtatcctgtggctgaatacgcgccat
cgtcatgatagtaaggcattgcgtacggcattgagattgcaatcgggcgcgccgctcgct
gccgaagcattattgcagccagaacgttggaagcagcggagcgtgctgtgccaaacattt
tctgctgcgatgacttcacgggaccagttttcgttgatagcacaactgaatcatgacgat
gcggatgcacgtattcactggctggccgcgctactgctggatgcaatgaaatggcaacag
ggagcccgtgagcatctggtgaatcaggatcagatcgaactggttgagcgtctggcgctc
gaaccttctgcgcacttacagtatgaactgcaacagtggctggcttgccgacaaaaattg
ctgactgtcaccggtgtgaatcgtgaactgctgttaacggaacgccttcttgatggcgaa
cgcacgcttgcttcatcggttaagcgcgacagccatccattttctgtttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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