KEGG   Equus caballus (horse): 100051816
Entry
100051816         CDS       T01058                                 
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
ecb  Equus caballus (horse)
Pathway
ecb04742  Taste transduction
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09150 Organismal Systems
  09157 Sensory system
   04742 Taste transduction
    100051816 (SCN2A)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ecb04040]
    100051816 (SCN2A)
Ion channels [BR:ecb04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   100051816 (SCN2A)
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH ATP-synt_B IQ IQCJ-SCHIP1
Other DBs
NCBI-GeneID: 100051816
NCBI-ProteinID: XP_014588001
Ensembl: ENSECAG00000020749
VGNC: 22734
Position
18:45407620..45549599
AA seq 2006 aa
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSL
DGNGTIFNRTVSMFNWDDYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGV
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTARQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
KLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNVRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKVKEGDGTPIKEDILIDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq 6021 nt   +upstreamnt  +downstreamnt
atggcacagtcagtgctggtaccaccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgcaaggatgaggatgatgaaaatggcccgaagccaaatagtgacttggaagcaggaaaa
tcccttccgtttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggacccgtactatatcaataaaaaaacgtttatagtattgaataaagggaaagcaatc
tctcgattcagtgccacctctgccctgtacattttaactcccttcaaccctattcgaaaa
ttagctattaagattttggtacattcgttattcaatgtgctcattatgtgcactatcctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacgtttctacgggatccatggaattggttggatttcacagttattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcattgagaacattcaga
gttctccgagcattgaaaacaatctcagtcattccaggcttgaagaccatcgtgggggcc
ctgatccagtcggtgaagaagctttcagatgtaatgatcctgactgtgttctgtctgagc
gtgtttgcactaataggactacagctgtttatgggcaacctgcggaataaatgtttgcaa
tggcccccagataattcttcctttgaaatcaacatcacttccttctttaataactcactg
gatgggaacggtaccattttcaataggacagtgagcatgtttaactgggatgactatatt
gaagataaaagtcacttttactttttggaagggcaaaatgacgcactgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtagaaatccc
aactatggctacacgagctttgacacgtttagttgggccttcttgtccttgtttcgtctc
atgactcaagacttctgggaaaacctttatcaactgacactacgtgctgctgggaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctaccttatcaatttaatc
ctggctgtggtggccatggcctacgaggaacagaatcaggcaacacttgaagaggctgaa
cagaaagaagctgaattccagcagatgcttgaacagttaaaaaaacaacaggaagaagct
caggcagcagctgcagcagcgtctgctgaatcaagagacttcagtggtgctggcggagtg
ggggttttctcagagagttcctcagtagcatcaaagttgagctctaagagcgaaaaagag
ctgaaaaacagaaggaagaaaaagaaacagaaagaacagtctggagaagaagagaaggag
gatggagtccgcaaatctgaatctgaagacagcataagaagaaaaggttttcgtttttcc
ttagaaggaagtaggctgacatatgaaaagaggttttcttctccacaccagtctttattg
agcatccgtggctcccttttctctccaagacgcaacagtagggcgagccttttcagcttc
agagggcgagcaaaggatattggctcggagaatgattttgctgatgacgagcacagcacc
tttgaagacaatgacagccgaagagactctctgttcgtgccgcacagacatggagagcgg
cgccacagcaacgtcagccaggccagccgtgcctccagggtgctccccattctgcccatg
aacgggaagatgcacagcgctgtggattgcaatggagtggtctccctggtcggaggccct
tctgccctcacgtctcctgctgggcagctcctgccagagggcacaactactgaaacagaa
atacgaaagagacggtccagttcttatcatgtttccatggatttgttggaagatcctaca
gcaaggcaaagagccatgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtataaatttgctaacatgtgtttaatttgg
gactgctgtaaaccatggttaaaggtgaaacatcttgtcaacctggtcgtgatggacccg
tttgtggacctggccatcaccatctgcattgttttaaatacactcttcatggccatggag
cactatcccatgacagagcagttcagcagtgtactgtcggtcgggaacctggtcttcact
gggatcttcacagcagaaatgtttctcaagatcattgctatggatccatattattacttt
caagaaggctggaatatttttgatggtttcatcgtgagccttagtttaatggaacttggt
ttggcaaacgtggaaggattgtcagttctccgatcatttcgactgcttcgagttttcaag
ttggcaaaatcttggccaactctgaacatgctgataaagatcattggcaattctgtgggg
gctttgggtaacctcaccttggtgctggccatcatcgtcttcatctttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgactgtgag
ctcccgcgctggcacatgcatgacttcttccactccttcctgattgtgttccgcgtgctg
tgtggagagtggatagagaccatgtgggactgtatggaggtcgctggccaaacgatgtgc
cttactgtcttcatgatggtcatggtgattggaaacttagtggttctgaaccttttcctg
gccttgctcttgagttcattcagttctgacaatcttgctgccactgatgatgataatgaa
atgaacaatctccagattgctgtgggaaggatgcagaaaggaattgattatgttaaaaga
aaactacgtgaatttattcagaaagcttttgttagaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccacaccaccata
gaaataggcaaagacctcaattatcttaaagatggaaatggaactaccagtggcataggc
agcagtgtagaaaaatatgtcgtggatgaaagtgattacatgtcgtttataaacaacccc
agcctcactgtgactgtcccaattgctgttggagaatctgactttgaaaatttaaacact
gaagaattcagcagcgagtcagatatggaggaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagtggatataggagctcctgctgagggagaacaacctgaggct
gaacctgaagaatcgctcgaacctgaagcctgtttcacagaagactgtgtacggaagttc
aagtgttgtcagataagcatagaggaaggcaaagggaaactgtggtggaacgtgagaaaa
acttgctataagatagtggagcataactggttcgaaaccttcatcgtcttcatgattctg
ctcagcagtggggcgctggcctttgaagatatatatattgagcagcgaaaaaccattaag
accatgttagaatatgctgacaaagttttcacttacatattcattctggaaatgcttctc
aagtgggttgcatatggttttcaagtatattttaccaatgcctggtgctggctagatttc
ctgattgtcgatgtctcattggttagcttaacagcgaatgccttgggttactcagaactc
ggtgccatcaaatccctcagaacactaagagctctgaggccactgagagccttatcccgg
tttgaaggaatgagggttgttgtcaacgctctcttaggagccattccatccataatgaac
gtgcttctggtttgtctgatcttttggctgatattcagtatcatgggagtgaatctcttt
gcgggcaagttttatcactgtattaactacaccaccggagaaatgtttgacgtaagcgtg
gtcaacaactacagcgagtgcaaagccctcatagagagcaatcagactgccaggtggaaa
aatgtgaaagtaaactttgataatgtgggactcggatatctttctctgcttcaagtagcc
acatttaagggatggatggacatcatgtatgcagctgtcgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatctttattattttt
ggttccttctttactctgaatctcttcattggtgtcatcatcgataacttcaatcaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaactgggttcaaagaaaccacaaaaacccatacctcgacctgctaacaaa
ttccaaggaatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaagaaatg
acaaacattttgtactggattaatctagtgtttattgttctgttcactggagaatgtgtg
ctgaaactaatctctcttcgttattactattttaccattggctggaatatttttgatttt
gtggtggttattctctccattgtaggcatgtttctggctgagctgatagagaaatatttt
gtgtccccgaccctgttccgagtgatccgtcttgccaggattggccgaatcctccgtctg
atcaaaggagctaaggggatccgcacgctgctctttgctctgatgatgtccctccctgca
ttgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggaatg
tccaactttgcctatgttaaaagggaagttggaattgatgacatgttcaactttgaaact
tttggcaacagcatgatctgtctgttccaaattaccacctctgctggctgggatggattg
ctagcacctattctcaacagtggccctccagattgtgaccctgaaaaagatcaccctgga
agctcagttaagggagactgtgggaacccatctgttgggattttctttttcgtcagttac
atcatcatatcatttctggttgtggtgaacatgtacatcgccgtcatcctggagaacttc
agtgttgctactgaggaaagtgcagagcccctgagtgaggatgactttgagatgttctac
gaggtttgggagaagtttgatcctgatgccactcagtttatagagttctccaagctctct
gattttgcagctgccctggatcctcctcttctcatagcaaaaccaaacaaagtccagctc
attgccatggacctgcccatggtcagtggggaccggatccactgccttgacattttattt
gcctttacaaagcgtgttttgggtgagagtggagagatggatgcccttcgaatacagatg
gaggagcgattcatggcatcaaatccctccaaagtctcctatgagcccatcacaaccact
ttgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttatagacgctac
ctcttgaagcaaaaagttaaaaaggtttcatgtatatataagaaagacaaagtcaaagaa
ggtgatggaacacctatcaaagaagatatcctcattgataaactaaatgagaattcaact
ccggagaaaaccgatgtaacaccttccaccacttcgccaccttcttatgatagtgtgacc
aagccagaaaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (8)   
   Pfam (8)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system