KEGG T01058: 100053186

Equus caballus (horse): 100053186

Entry

100053186 CDS T01058

Gene name

LIG1

Definition

ligase I, DNA, ATP-dependent

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

ecb Equus caballus (horse)

Pathway

ecb03030	DNA replication
ecb03410	Base excision repair
ecb03420	Nucleotide excision repair
ecb03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:ecb03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:ecb03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:ecb03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:ecb03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme DDR

Other DBs

NCBI-GI:

194215708

NCBI-GeneID:

100053186

Ensembl:

ENSECAG00000015424

Position

AA seq 913 aa
MQRSIMSFFHPKKEGKAKKPEKEASNGIRETEPPPKVALKERNGVVPEGDSPVKRPGRKA
ARVLGSEGEEEDEALTPPKDQKPAPDSPKVSPPSPESTPALCSASPARVSPSGIPKRRTA
RKQLPKRAIQDVLEDQSEDEDREAKRKKEEDEAETPTESLTEPEVAKRKEVEEKDRPTTP
PELPENSTEPPTDSVAEPEGAVKQEPQEDQPQPPPRAPKTLSSFFAPRKPAVKKEVKEEE
GSGAPRKEETKGPLDPPSYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIEEVSARLR
MVETLSNLLRSVVALSPPDLLPILYLSLNRLGPPQQGLELGIGDGILLKAVAQATGRQLE
SVRAEAAEKGDVGLVAESSRSTQRLMLPPPALTASGVFTKFQDIARLAGSASTTKKMDVI
KGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPPAVVDAGKGK
TPEARKTWLEEQGMILKQTFCEVPDLDRIVPVLLEHGLERLPEHCRLSPGVPLKPMLAHP
TRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDVISRIPK
IRLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYLNG
KSLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVKTL
DVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLACYDEES
EELQAICKVLGAGFSDEKLEEHHCSLQALVLPSPRPYVRADGAVAPDHWLDPSAVWEVKC
ADLSLSPIYPAARGMMDGEKGISLRFPRFIRVREDKKPEEATTSAQVAHLYWKQSQIQNQ
QGTDVDSDPEDFY

NT seq 2742 nt +upstreamnt +downstreamnt
atgcagcgaagtatcatgtcatttttccaccccaagaaagagggcaaagcaaagaagcca
gagaaggaagcgtccaacggcatcagagagacggaaccccctccaaaggtggcgctgaag
gagcggaatggagtggtgcccgagggcgactctccagtgaagaggccagggaggaaggca
gcccgggtcctgggcagcgaaggggaggaggaggacgaggccctcacgccccccaaagac
cagaagcctgccccggactctccgaaagtctcccctcccagtcctgagagcacccctgcc
ctctgcagcgcctctcctgcgcgcgtctccccgtcagggatcccgaagcgccgcacagct
cggaagcagcttcctaaacgggcgattcaggatgtcctggaagatcagagcgaggacgag
gacagggaagccaagaggaagaaggaggaagacgaagcagagaccccgacagaaagcctc
acagagcctgaagtggccaaaaggaaggaagtagaagagaaggaccggcccacgacgccc
ccagagctcccagagaactccacagagcccccgacggacagcgttgccgagcctgagggg
gccgtgaagcaggagccgcaggaggaccagcctcagcctcctcccagagcccccaagacg
ctcagcagcttcttcgccccccggaagcctgcagtcaaaaaagaagtgaaagaagaggag
gggtccggcgccccgagaaaggaggagaccaagggacccctggaccctcccagctacaat
cctgccaagaacaactaccatcccgtcgaagacgcctgctggaagccgggccagaaggtc
ccttatctggcggtggcccggacgtttgagaagatcgaggaggtttctgcgcggctccgg
atggtggagacgctgagcaacttgctgcgctccgtggtggccctgtcacccccagacctg
ctccccatcctctacctcagcctcaaccgccttgggccgccccagcagggcctggagctt
ggcatcggggacggcatccttctcaaggccgtggcccaggccacaggtcggcagctcgag
tctgtccgggctgaggccgccgagaagggcgacgtgggcctggtggccgagagcagccgc
agcacgcagaggctcatgcttcccccgcccgccctcaccgcctctggggtcttcaccaag
ttccaggacatcgcccggctcgctggcagcgcttccacaaccaagaagatggacgtcatc
aaaggcctctttgttgcctgccgccactcagaagcccggttcatcgccagggccctgagt
ggacggctgcgcctcgggctggcagagcagtcggtgttggccgccctggcccaggccgtg
agcctcacacccccgggccaagaattccccccggccgtggtggatgctgggaagggcaag
acaccagaggccagaaaaacatggctggaggagcaaggcatgatcctgaagcagacgttc
tgtgaggtgcccgacctggaccggatcgtccccgtgctgctggagcatggcctggaacgc
ctcccggagcactgcaggctgagcccaggggtccccctgaaaccaatgttggcacacccc
acccggggcgtcagtgaggtcctgaaacgcttcgaggaggcagccttcacctgcgagtac
aaatacgatgggcagagggctcagatccatgtcctggaaggcggggaggtgaaaatcttc
agcaggaatcaggaggacaataccggaaagtaccccgacgtcatcagccgcatccccaag
attagactcccgtcagtcacgtccttcatcctggacactgaagccgtggcctgggaccgg
gaaaagaagcagatccagccattccaagtgctcaccacccgcaagcgcaaggaggtggac
gccgcggagatacaggtgcaggtgtgtctgtacgccttcgacctcatctacctcaatgga
aagtccctggtgcgggagcccctttcccgacgccggcagctgcttcgggagaacttcgtg
gagacggagggcgagttcgtcttcgccacctccctggacaccaaggacacggaccagatc
gccgagttcctggagcagtcggtgaaagactcctgcgaggggctcatggtgaaaaccctg
gatgtcgatgccacctacgagatcgccaagaggtcgcacaactggctcaagctgaagaag
gactacctcgatggcgtgggcgacaccctggacctcgtggtgatcggcgcctacctgggc
cgggggaagcgggccggccgctacgggggcttcctgctggcctgctacgacgaggagagt
gaggagctgcaggccatatgcaaggtgctgggagccggtttcagcgacgagaagctggag
gagcatcactgctccctgcaggccctggtgctgcccagcccgcgcccctacgtccgggcg
gacggcgccgtggcccccgaccactggctggaccccagcgccgtgtgggaggtgaagtgc
gccgacctgtccctctcccccatctaccctgcggcccggggcatgatggatggcgagaag
gggatctcccttcgcttccctcggtttattcgcgtccgtgaagacaagaagcccgaggag
gccaccaccagcgcccaggtggcccatctgtactggaagcaaagtcagattcagaaccag
caaggcacggacgtggactccgacccggaagatttctactag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   ENSEMBL-ECB (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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