KEGG   Equus caballus (horse): 100059650
Entry
100059650         CDS       T01058                                 
Symbol
LTBR
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3 isoform X2
  KO
K03159  lymphotoxin beta receptor TNFR superfamily member 3
Organism
ecb  Equus caballus (horse)
Pathway
ecb04060  Cytokine-cytokine receptor interaction
ecb04061  Viral protein interaction with cytokine and cytokine receptor
ecb04064  NF-kappa B signaling pathway
ecb04066  HIF-1 signaling pathway
ecb04672  Intestinal immune network for IgA production
ecb05166  Human T-cell leukemia virus 1 infection
ecb05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100059650 (LTBR)
   04066 HIF-1 signaling pathway
    100059650 (LTBR)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100059650 (LTBR)
   04061 Viral protein interaction with cytokine and cytokine receptor
    100059650 (LTBR)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100059650 (LTBR)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100059650 (LTBR)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100059650 (LTBR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:ecb04050]
    100059650 (LTBR)
Cytokine receptors [BR:ecb04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   100059650 (LTBR)
SSDB
Motif
Pfam: TNFR_c6
Other DBs
NCBI-GeneID: 100059650
NCBI-ProteinID: XP_001492220
Ensembl: ENSECAG00000000458
VGNC: 19834
UniProt: A0A9L0SWA1
Position
6:34957308..34963879
AA seq 421 aa
MRLPSATSPCGLALGPLMLGLCALLAASQPRSVPPYHTENHTCQDEEKEYYEAKHQVCCS
RCPPGTHVSAECTRGQNTVCATCPENSYNEHWNHLSICQLCRPCDQMLGFEETAPCTGKQ
KTQCRCQPGMFCVLRDPECVHCEPLSDCPPGTEAEPKDEVWEANSNCVPCKTGYFQNTSS
PSARCQPHTRCEDQGLVEAAPGTAQSDTSCRNPSESPEMPGTMLVLAILLPLVSFLFLTT
VLACTWKSHPSLCRKLGSLLKRRPEGEESNAPDGSWEPPRVSPHFPDLVEPLLPISADLS
PALARLPTTPALEEEVLQQQSPLGQARELEAELPEQGPVAHGTNGIHVTGGSVTVTGNIY
IYNGPVLGGARGPGDPPAPPEPPYPIPEEGTPGPPGLSTPYQEDGKAWHLAETETLGCHA
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgcttgccgtccgccacctccccctgcggcctggccttggggccactcatgctgggc
ctctgcgctctgctggcagcatctcagcccagatcggtgcccccataccacacggaaaac
catacctgccaggacgaggaaaaggagtactacgaggccaagcatcaggtctgctgctcc
cgctgccccccaggcacgcatgtctcagctgaatgtacccgtggccagaacacagtttgt
gccacatgtcccgaaaattcgtacaacgagcactggaaccatctgtccatctgccagctg
tgccgcccctgtgaccagatgctgggcttcgaggagactgcaccttgcactggcaaacag
aaaacccagtgccgctgccagccaggaatgttctgtgtccttcgggaccctgagtgtgta
cactgcgagccactctctgactgcccacctggcaccgaagccgagcccaaagatgaagtc
tgggaggctaacagcaactgtgttccctgtaagacagggtacttccagaacacctcctcc
cccagcgcccgctgccagccccacaccaggtgtgaggaccagggcctggtggaggccgct
cctggcaccgcccagtcggacaccagctgcagaaatccgtccgagtccccggagatgcca
ggaaccatgctggtgctggccatcctgctgccgctggtctcctttctgttcctcaccacc
gtcctcgcctgcacctggaagagccacccgtctctctgcagaaagctgggatccctgctc
aagaggcgtccagagggagaggaatcaaatgctcctgatggaagctgggagcctccgagg
gtcagcccacatttccctgatctggtagagccacttctgcccatctctgcagacttgtcc
ccggccctggccaggctcccaacgacgccagctttggaggaagaggtgctacaacagcag
agtcctcttggccaggccagggagctggaggctgagctcccagaacaaggccccgtggcc
cacggtaccaacggcattcatgtcactggcgggtctgtgactgtcactggcaacatctac
atctacaatgggccagtgctggggggagcacggggccctggcgaccccccagctcccccc
gagcctccataccccatcccggaagaaggtacccctggccctcccgggctctctacaccc
taccaggaagatggcaaagcttggcacctggctgagacagagacactggggtgccatgcc
ctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (54)   

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