KEGG E.coli_CFT073: c2579

Escherichia coli O6:H1 CFT073 (UPEC): c2579

Entry

c2579 CDS E.coli_CFT073

Gene name gmd

Definition GDP-mannose 4,6-dehydratase (EC:4.2.1.47)

Orthology K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]

Pathway ecc00051 Fructose and mannose metabolism
ecc00520 Amino sugar and nucleotide sugar metabolism
ecc01100 Metabolic pathways

Class Metabolism; Carbohydrate Metabolism; Fructose and mannose metabolism
[PATH:ecc00051]
Metabolism; Carbohydrate Metabolism; Amino sugar and nucleotide
sugar metabolism [PATH:ecc00520]

SSDB

Motif Pfam: Epimerase RmlD_sub_bind Polysacc_synt_2 adh_short NmrA KR
PROSITE: ADH_SHORT

Other DBs NCBI-GI: 26248427
NCBI-GeneID: 1037872
UniProt: P0AC89

Structure

PDB: 1DB3

Position complement(2414729..2415850)

AA seq 373 aa
MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL
HYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFL
GLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYAC
NGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM
LQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKP
GDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLL
KSHGYDVAIALES

NT seq 1122 nt +upstreamnt +downstreamnt
atgtcaaaagtcgctctcatcaccggtgtaaccggacaagacggttcttacctggcagag
tttctgctggaaaaaggttacgaggtgcatggtattaagcgtcgtgcatcgtcattcaac
accgagcgcgtggatcacatttatcaggatccgcacacctgcaacccgaaattccatctg
cattatggcgacctgagtgatacctccaacctgacgcgcattttgcgtgaagtgcagccg
gatgaagtgtacaacctgggcgcaatgagccacgttgcggtttcttttgagtcaccggaa
tataccgcagacgtcgatgcgatgggtacgctgcgcctgctcgaggcgatccgcttcctc
ggtctggaaaagaaaacccgtttctatcaggcttctacttctgaactgtacggtctggtg
caggaaattccgcagaaagagaccacgccgttctacccgcgatctccgtatgcggttgcc
aaactgtacgcctactggatcaccgttaactaccgcgaatcctacggcatgtacgcctgt
aacggcattctctttaaccatgaatccccgcgccgtggcgagactttcgttacccgcaaa
atcacccgcgcaatcgccaacatcgcccaggggctggagtcgtgcctgtatctcggcaat
atggattccctgcgtgactggggccatgccaaagactacgtaaaaatgcagtggatgatg
ctgcaacaggaacaaccggaagatttcgttatcgcgaccggcgttcagtactccgtacgt
cagttcgtggaaatggcggcagcacagttgggcatcaaactgcgctttgaaggcacgggt
gttgaagagaagggcattgtggtttccgtcaccgggcatgacgcgccgggcgttaaaccg
ggcgatgtgattatcgccgttgacccgcgttacttccgtccggcggaagttgaaacgctg
ctcggcgacccgaccaaagcgcacgaaaaactgggctggaaaccggaaatcaccctcaga
gagatggtgtctgaaatggtggctaatgacctcgaagcggcgaaaaaacactctctgctg
aaatctcacggctacgacgtggcgatcgcgctggagtcataa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (7)   
   Pfam (6)   
   PROSITE (1)   
All databases (21)

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