KEGG   Escherichia coli O157 H7 EDL933 (EHEC): Z1086
Entry
Z1086             CDS       T00044                                 
Symbol
ybjF
Name
(GenBank) putative enzyme
  KO
K03212  23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
Organism
ece  Escherichia coli O157:H7 EDL933 (EHEC)
Brite
KEGG Orthology (KO) [BR:ece00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ece03009]
    Z1086 (ybjF)
Enzymes [BR:ece01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     Z1086 (ybjF)
Ribosome biogenesis [BR:ece03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Z1086 (ybjF)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_25 Methyltransf_15 Cons_hypoth95 Methyltransf_12
Other DBs
NCBI-ProteinID: AAG55235
UniProt: Q8X6Q5
Position
1025464..1026591
AA seq 375 aa
MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQAQLPQLKVITVNIQPVHMAIM
EGETEIYLTEQQALVERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIALEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMF
PHTAHYEVLTLLVKM
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataacgcagccg
attccagagcaactctccgctaaaaccgccgatcttaaaaatctgctcgccgactttccg
gttgaggaatggtgcgcgccggtgtcaggcccggaacaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaccactgctcggtatgctgcatcgcgacggcaca
ccggaagacctttgtgactgcccgctttatcctgcctcatttgcgcccgtttttgcggcg
ctaaaaccgtttatcgcccgagcggggttaacgccctacaacgtggcgcgtaagcgtggc
gaactgaaatacattctgctgactgaaagccagagcgatggcggcatgatgctgcgcttt
gtactgcgttctgaaaccaaactagcacaactgcgtaaggcattgccgtggttacaggca
caattgccgcagctaaaagttatcaccgtcaatattcagccggtacatatggcgattatg
gaaggggagacggagatctacctgaccgaacaacaggcgctggtagagcgttttaacgat
gtgccgctgtggatccgtccgcaaagtttcttccagactaatccggcggtcgccagccag
ctgtacgctaccgcgcgcgactgggtacgacagctgccggttaaacatatgtgggatctg
ttctgcggtgtggggggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcgctagaggccattgcctgtgcaaagcagtcagccgctgaactgggctta
acgcgtctgcaatttcaggcgctggactccactcagtttgccaccgctcagggggaggtg
ccggagctggtgctggttaacccgccgcgccgcggcattggtaaaccgctgtgtgattat
ctctcaacgatggcaccgcgttttattatctactccagctgtaacgcccaaaccatggcg
aaagatatccgcgaactgccaggttaccgcatcgaacgggtacagctttttgatatgttc
ccgcacaccgcgcactatgaagtgctgacgctgctggtaaaaatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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