KEGG E.coli_O157_EC4115: ECH74115

Escherichia coli O157:H7 EC4115 (EHEC): ECH74115_0373

Entry

ECH74115_0373 CDS E.coli_O157_EC4115

Gene name betA

Definition choline dehydrogenase (EC:1.1.99.1)

Orthology K00108 choline dehydrogenase [EC:1.1.99.1]

Pathway ecf00260 Glycine, serine and threonine metabolism

Class Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:ecf00260]

SSDB

Motif Pfam: GMC_oxred_N GMC_oxred_C FAD_binding_2 DAO Lycopene_cycl
Pyr_redox_2 HI0933_like
PROSITE: GMC_OXRED_1 GMC_OXRED_2

Other DBs NCBI-GI: 209399344
NCBI-GeneID: 6967972
UniProt: B5Z1R0

Position complement(377103..378791)

AA seq 562 aa
MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY
NWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLENWSYLD
CLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGYQ
QEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFDCKRAVGVEWLEG
DSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLPGVGENLQDHL
EMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSREEFAWPNI
QYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFNYMSHEQD
WQEFRDAIRITREIMHQPALDQYRGREISPGTECQTDEQLDEFVRNHAETAFHPCGTCKM
GYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKMADMIRGKEALPRS
TAGYFVANGMPVRAKKMSRDLN

NT seq 1689 nt +upstreamnt +downstreamnt
ttgcaatttgactacatcattattggtgccggctcagccggcaacgttctcgctacccgt
ctgactgaagatccgaatacctccgtgctgctgcttgaagcgggcggcccggactatcgc
tttgacttccgcacccagatgcccgctgccctggcattcccgctacagggtaaacgctac
aactgggcttacgagacggaacctgaaccgtttatgaataaccgtcgcatggagtgcgga
cgcggtaaaggcctgggtggatcgtcgctgatcaacggcatgtgctatatccgtggcaac
gcgatggatctcgacaactgggcaaaagaacccggtctggagaactggagttatctcgat
tgcctgccctactaccgcaaggccgagacccgcgacgtgggcgagaacgactaccacggc
ggcgacggcccggtgagcgtcaccacctccaaacccggcgtcaatccgctgtttgaagcg
atgattgaagcgggcgtgcaggcgggctacccgcgcacggacgatctcaacggttatcag
caggaaggtttcggcccgatggatcgcaccgtcacgccgcagggccgccgcgccagcacc
gcgcgcggttatctcgatcaggccaaatcgcgcccaaacctaaccattcgtactcacgcc
atgaccgatcacattatttttgactgtaaacgcgcggtgggcgtcgagtggctggaaggc
gacagcaccattccgacccgcgcgacggcgaacaaagaagtgctgttatgtgcaggcgcg
attgcctcaccgcagatcctgcaacgctctggcgtcggcaacgctgaactgttggccgag
tttgatattccgctggtgcatgatttacccggcgtcggtgaaaatcttcaggatcatctg
gagatgtatctgcaatatgagtgcaaagaaccggtttccctctaccctgccctgcagtgg
tggaatcagccgaaaatcggtgcggagtggctgtttggcggcaccggcgttggtgccagc
aaccactttgaagcaggcggatttattcgcagccgagaggaatttgcgtggccgaatatt
cagtatcacttcctgccggtagcgattaactataacggctcgaatgcagtgaaagagcac
ggcttccagtgccacgtcggctcgatgcgctcgccaagccgtgggcatgtgcggattaaa
tcccgcgacccgcaccagcatccggcaattctgtttaactacatgtcgcacgaacaggac
tggcaggaattccgcgacgcaattcgcatcacccgcgagatcatgcatcaacccgcgctg
gatcagtatcgtggccgcgaaatcagccccggcacggaatgtcagacggatgagcagctc
gatgagtttgtgcgtaaccacgccgaaaccgccttccatccgtgcggtacctgcaaaatg
ggctacgacgagatgtccgtggttgacggcgaaggccgcgtgcatgggctggaaggcctg
cgcgtggtggatgcgtcaattatgccgcagattatcaccgggaatttgaacgccacgacg
attatgattggcgagaaaatggcggatatgattcgcgggaaggaagcgttgccgaggagc
acggcgggatattttgtggcaaatgggatgccagtaagagcgaaaaaaatgagtcgtgat
ttgaactga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (7)   
   PROSITE (2)   
All databases (20)

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