KEGG   Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_3044
Entry
E2348C_3044       CDS       T00796                                 
Symbol
ygcF
Name
(GenBank) predicted protein
  KO
K10026  7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
Organism
ecg  Escherichia coli O127:H6 E2348/69 (EPEC)
Pathway
ecg00790  Folate biosynthesis
ecg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ecg00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00790 Folate biosynthesis
    E2348C_3044 (ygcF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ecg03016]
    E2348C_3044 (ygcF)
Enzymes [BR:ecg01000]
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.99  Other carbon-nitrogen lyases
    4.3.99.3  7-carboxy-7-deazaguanine synthase
     E2348C_3044 (ygcF)
Transfer RNA biogenesis [BR:ecg03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    E2348C_3044 (ygcF)
SSDB
Motif
Pfam: Radical_SAM Fer4_12 DUF5701
Other DBs
NCBI-ProteinID: CAS10592
UniProt: B7UHJ3
Position
complement(3136697..3137368)
AA seq 223 aa
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK
TKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS
GTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTD
DKPRVIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA
NT seq 672 nt   +upstreamnt  +downstreamnt
atgcagtacccgattaacgagatgttccagaccctgcaaggtgagggttactttaccggc
gtccccgccatttttattcgtttacagggatgtccggttggctgtgcctggtgcgacacc
aaacacacctgggaaaagcttgaggatcgggaagtctcccttttcagcattctggcgaag
accaaagagagtgataagtggggggcggcgagcagtgaagatttgctggctgtcattggc
cgtcagggatacaccgcgcgtcacgtggtgattacgggtggtgagccttgcattcatgat
ttgctgccactgactgacctgctcgaaaagaacggttttagctgccagatcgaaaccagt
ggtactcatgaggtacgctgcacaccgaatacctgggttaccgtatcgccaaagctgaac
atgcgcggcggctatgaagtattgtcgcaagccctggagcgagctaacgaaatcaaacac
ccagttggacgcgtacgtgatatcgaagcactggatgaattgcttgcgacgctgaccgat
gataaaccgcgagtcattgcacttcagccaattagccagaaggaagatgctacgcgttta
tgtatcgatacctgcattgcgcgcaactggcgtttgtcgatgcagacacataaatatttg
aatattgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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