KEGG   Escherichia coli O127 H6 E2348/69 (EPEC): E2348C_3145
Entry
E2348C_3145       CDS       T00796                                 
Symbol
recJ
Name
(GenBank) ssDNA exonuclease, 5-3'-specific
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ecg  Escherichia coli O127:H6 E2348/69 (EPEC)
Pathway
ecg03410  Base excision repair
ecg03430  Mismatch repair
ecg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ecg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E2348C_3145 (recJ)
   03430 Mismatch repair
    E2348C_3145 (recJ)
   03440 Homologous recombination
    E2348C_3145 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ecg03400]
    E2348C_3145 (recJ)
DNA repair and recombination proteins [BR:ecg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     E2348C_3145 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     E2348C_3145 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      E2348C_3145 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB PEP-utilizers
Other DBs
NCBI-ProteinID: CAS10693
UniProt: B7UHU1
Position
complement(3265020..3266753)
AA seq 577 aa
MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSNIDYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTDHHLPGDTLPAAEAIINPNLR
DCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIAIPNLAELLDLVALGTVADVVPL
DANNRILTWQGMSRIRAGKCRPGIKALLEVANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQVEALTLCEKLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GMMLKFGGHAMAAGLSLEEDKFELFQQRFGELVTEWLDPSLLQGEVVSDGPLSAAEMTME
VAQLLRDAGPWGQMFPEPLFDGHFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTA
LWPDNGVREVQLAYKLDINEFRGNRSLQIIIDNIWPI
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgaaacaacagatacaacttcgtcgccgtgaagtcgatgaaacggccgacttgcccgct
gaattgcctcccttgctgcgccgtttatatgccagccggggtgtgcgtagcgcgcaggaa
ctggaacgcagtgttaaaggcatgctgccctggcagcaactgagcggcgtcgaaaaggcc
gttgagatcctttacaacgcttttcgcgaaggaacgcggattattgtggtcggtgatttc
gacgccgacggtgccaccagcacggctctaagcgtgctggcgatgcgctcgcttggttgc
agcaatatcgactacctggttccaaaccgtttcgaagacggttacggcttaagcccggaa
gtagtcgatcaggctcatgcccgtggcgcgcagttaattgtcacggtggataacggtatt
tcctcccatgcgggggttgaacacgctcgttcgttgggcattccggttattgttaccgat
caccatttgccaggcgacacattacccgcagcggaagcgatcattaaccctaacttgcgc
gactgtaatttcccgtcgaaatcactggcaggcgtgggtgtggcgttttatctgatgctg
gcgctgcgcacctttttgcgcgatcagggctggtttgatgagcgcggcatcgcaattcct
aatctggcagaactgctggatctggtcgcgttggggacagtggcggacgtcgtgccgctg
gacgctaataatcgcattctgacctggcaggggatgagtcgcatccgtgccggaaagtgc
cgtccggggattaaagcgctgctggaagtggccaatcgcgatccacaaaaactcgccgcc
agcgatttaggttttgcgctggggccacgtctcaatgctgccgggcgactggacgatatg
tccgttggcgtggcgctgttgttgtgtgacaacattggcgaagcgcgtgtgctggcgaat
gaactcgatgcactaaaccaaacacgtaaagagatcgaacagggaatgcaggttgaagcg
ctcactctgtgcgagaagctggaacgtagccgcgacacgctgccaggtgggctggcaatg
tatcaccctgaatggcatcagggcgttgttggcattctggcatcgcgtatcaaagagcgt
tttcaccgtccggttatcgcctttgcgcctgcgggcgacggtacgctgaaaggttccggt
cgctccattcaggggctgcatatgcgcgatgcgctggagcggctagacacgctttacccc
ggcatgatgctcaagtttggcggccatgcgatggcggcaggattgtcgctggaagaggat
aaattcgaactctttcagcaacgctttggcgaactggttaccgagtggttagatccttct
ttattgcaaggggaagtggtatcagacggcccattaagtgcggcagagatgaccatggaa
gtggcgcagctgttgcgtgatgctggcccgtggggacaaatgttcccggaaccgttgttt
gacggtcatttccgtctgttgcaacagcggctggtgggcgagcgtcatttgaaggtgatg
gtcgaaccggtcggcggcggtccgctgctggacgggattgcttttaatgtcgataccgcc
ctctggccggataacggtgtgcgcgaagtgcaactggcttacaagctcgatatcaacgag
tttcgcggcaaccgcagcctgcaaattatcatcgacaatatctggccaatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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