KEGG   Ehrlichia chaffeensis Heartland: ECHHL_0817
Entry
ECHHL_0817        CDS       T03085                                 
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
echa  Ehrlichia chaffeensis Heartland
Pathway
echa03030  DNA replication
echa03430  Mismatch repair
echa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:echa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ECHHL_0817 (dnaE1)
   03430 Mismatch repair
    ECHHL_0817 (dnaE1)
   03440 Homologous recombination
    ECHHL_0817 (dnaE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:echa03032]
    ECHHL_0817 (dnaE1)
   03400 DNA repair and recombination proteins [BR:echa03400]
    ECHHL_0817 (dnaE1)
Enzymes [BR:echa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ECHHL_0817 (dnaE1)
DNA replication proteins [BR:echa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ECHHL_0817 (dnaE1)
DNA repair and recombination proteins [BR:echa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ECHHL_0817 (dnaE1)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 PHP tRNA_anti-codon
Other DBs
NCBI-ProteinID: AHX03953
Position
complement(938757..942017)
AA seq 1086 aa
MPALALTDSGNLFGSLEFSDYASSLGVQPIIGCNIMMSYNGDSIGELVLLVKDQIGYNNI
VNLVSNSFKDSQSNKVNRVDLEKLIDLKDGIIVLTGGHDGFLSQLLLGNVIDYGIIDKLL
LAFNGNLYVELQRHGMEEEKIIEKTLVNFAYEKDLPLVATNDVLFAKKNDFLAHDVLSCI
SDGNYIAQEGRKMFTEEHYFKSSDEMYRLFKDIPEAVSNTVLIAQRCSFMPETRKPMLPH
FPCSSGKNESQELISQAINGLDNRLKSKSLSTEQVSKYYERLHYELDIIISMDYAGYFLI
VSDFICWSKRNDIMVGPGRGSGAGSLVAWSLQITDLDPIEFGLIFERFLNPDRISMPDFD
IDFCQEKRDYVIEYVRKKYGYVAHIITFGKLQAKAVLRDVGRVMQMPYFQVDRICKMIPH
NPVKPVTLSEAIEMDKNLQKEQDDDETVAKLLEISLKLEGLYRHVSIHAAGIVICDRELE
ELLPLYYDSTSSLPITQYNMKYTEKAGLVKFDFLGLRTLTVINQICHLVNRGGHSVDISR
IPLNDRKTYEMLSAGDSVGVFQLESSGMREVISKLKPDNINDIIALISLYRPGPMDNISI
YIARKHGFEKPDYIHPILEDVLRETFGVIIYQEQVMEIAKIMAGYSLGEADLLRRAMGKK
IKEEMDNQRRTFINGAVSNGIEEEKASYIFDLVAKFAGYGFNKSHAAAYALISYQTAYLK
ANYTLEFFTASMNLDIMDKDKLEMLCHQAKLHGIEILPPDINSSKVLFTIEGASSIRYAL
GALKNVGQHSAKEIVDDVAYKDIWDFIDRVSTKCVHKRILESIIKAGVLDSIHSNRKQLF
ESVFLFLDIIEYNKYNANFNQFSLFNDKNHYKLSETDDWTKEEKLNNEFSSIGFYLNHHP
MENYKYLLDKLNIGFIHYDDKSSYNNVIVGIISNVKVRSTNKDKFAVVTLSDPFNIHEIV
FYNGNIIEDNKDLFTTGASVIIEMDNTFYSASVRLLGKNIYSFENKISSIIKTMVIHVNA
KNSVVIKELSSLLQNRGSTVVLIDLVLPNDHVTIQLPNSFLVTPLIFAQIFKLNWVKDIE
INSILV
NT seq 3261 nt   +upstreamnt  +downstreamnt
atgcctgcattagcattaacagattcaggtaatttatttggatctttggaattttctgat
tatgcatcgagtttaggtgtacagcctattataggctgtaacataatgatgagctataat
ggtgatagtattggagaactggtattattagtaaaagatcaaataggatataataatatc
gttaatcttgttagtaattcatttaaggatagccagtccaacaaagttaatagagtagat
ttagaaaaacttattgatctgaaagatggtattattgttttaacaggaggtcatgatgga
tttttatcccaacttttgttaggtaatgttattgactatggcattatagataagttgtta
cttgcttttaatgggaatctttatgttgaacttcaacgtcatggaatggaagaggaaaaa
atcatagaaaaaacacttgttaattttgcttatgagaaagatttgccattggttgccacg
aatgatgtgttgtttgctaagaaaaatgattttttagcgcatgatgttttatcttgtata
tcagatggtaattatattgcacaggaaggccgaaagatgttcacagaagagcattatttt
aagtcttctgatgagatgtataggttgtttaaggatattcctgaagcagtttctaatact
gtgttaatagcacagcgttgttcttttatgccagaaaccaggaaacctatgttacctcat
tttccttgttcaagtggtaaaaatgagagtcaagaattaataagtcaagctattaatgga
ttggataatcgtttaaaaagtaaaagtttatctacagaacaagtttccaagtactatgaa
agactgcattatgaattagatattattatctcaatggattatgctgggtattttttgata
gtatcggattttatatgttggagtaaaagaaatgatataatggtaggtcctggtagagga
tctggggctggttctcttgttgcttggtctttgcaaattactgatcttgaccctatagaa
tttggtttaatttttgaaagatttttaaatcctgaccgtatttcaatgccagattttgat
attgatttttgtcaggaaaagagagattacgttatagagtatgtaagaaagaaatatggt
tacgttgctcacattataacttttggaaaattacaagctaaggctgtgcttcgtgatgtg
ggtagagttatgcagatgccttatttccaggtggatagaatctgtaaaatgattcctcac
aacccagttaagcctgttactttatctgaagcaatagagatggataaaaatttgcagaaa
gagcaggatgatgatgaaacagttgctaaattattagaaatatcattaaagcttgaaggg
ctgtatagacatgtttcgatacatgctgcaggtattgtaatttgtgatagagaattggaa
gaattactgcctttatattatgatagcacgtcttctcttcctattacacagtataatatg
aaatatactgagaaagcaggattagtgaaatttgattttttgggattgcggactttaact
gtaataaatcaaatttgtcatttagttaatagaggaggtcacagtgttgatatatcacgt
attcctttaaatgatagaaaaacatatgaaatgttgtctgcaggtgattctgttggtgta
ttccagcttgaaagttcgggtatgagggaagtaattagtaagctgaagccagataatata
aatgatattatagcattgatttctctgtataggccaggtcctatggataacatttctata
tatatagcacgcaagcatgggtttgaaaaaccagattatatacatccaattttagaagat
gtccttagagaaacttttggggttataatttatcaagagcaagtaatggaaattgccaag
attatggctggatatagtttaggtgaagcagatttgttaaggcgtgctatgggaaaaaag
attaaggaggagatggataatcaacgcagaacttttataaatggtgctgttagcaatgga
atagaggaagagaaggcaagctatatttttgatttagtagcaaaatttgcgggatatggg
tttaataaatcacatgctgcagcttatgctttgatcagttatcagacagcttatttgaaa
gctaattatacgttggaattttttactgcttcgatgaatttagatataatggataaggat
aagttagaaatgttgtgtcatcaagcaaagttgcatggtattgaaatattacctccggat
attaactcttctaaagtattgtttactattgagggtgcatcgtctattagatatgccctt
ggagctcttaagaatgtaggacagcattcagcaaaagagatagtagacgatgttgcttat
aaagacatatgggattttattgacagagtaagtactaaatgtgtgcacaagagaatactg
gaaagtattattaaagcgggggttctggatagtattcatagcaatagaaagcagcttttt
gaatcagtatttttatttttagatattattgaatataataagtataatgctaattttaac
caatttagtttgtttaatgataaaaatcattataagttatcagaaactgatgattggact
aaagaagaaaagctgaataatgagttttcctctataggtttttatcttaatcatcatccc
atggaaaactataagtatcttttagacaaattgaatataggttttattcactacgatgat
aaatcttcttataataatgtgattgtaggtataatttctaatgttaaagtgcgttctaca
aataaggataagtttgcagttgtaactctttctgatccttttaacattcatgaaatagtt
ttttataatggaaatataatagaagataataaagacttatttactactggtgcatctgta
attattgagatggataatactttttatagtgcctcagtacgattacttggtaaaaatatc
tatagttttgaaaacaaaatttcttctattataaaaactatggttatacatgttaatgct
aagaatagtgttgtaataaaagagctatctagtttgttgcagaataggggatctactgtt
gtattaattgatctggttcttccaaatgatcatgtgacaattcaattgccaaatagcttt
ttagttactcctttaatttttgcacaaatttttaagttaaattgggtaaaggatattgag
attaatagcattttagtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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