KEGG T03365: ECHWP

Ehrlichia chaffeensis West Paces: ECHWP_0180

Entry

ECHWP_0180        CDS       T03365

Name

(GenBank) radical SAM methylthiotransferase, MiaB/RimO family protein

K18707

threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]

Organism

echp Ehrlichia chaffeensis West Paces

Brite

KEGG Orthology (KO) [BR:echp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:echp03016]
    ECHWP_0180
Enzymes [BR:echp01000]
2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     ECHWP_0180
Transfer RNA biogenesis [BR:echp03016]
Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    ECHWP_0180

SSDB

Motif

Pfam:

Radical_SAM UPF0004 TK TRAM Radical_SAM_2

Other DBs

NCBI-ProteinID:

AHX10921

Position

194955..196193

AA seq 412 aa
MSDVITFGCRLNFYESEVIKNNLKKAQLDDVIVVHSCAVTNEAERQVKSRIRKLYRDNAN
VKIIVAGCAVQLNPELYVNMPGVIKVLGNQDKLKYESYLAKDKIIVSKIENSKEVVQDSV
KGFSGKSRALIEIQNGCNHECTFCVITKARGNNRSLYIEDIITKVKACVDNGYNEVVFTG
VDISDFGLDIYGQRVLGTMIKRVLSAVPQLRRLRLSSIDVAEIEDDLINIIINEPRFMPH
LHLSLQSGNNLILKRMKRRHSREQVIEFCNKITSKRKEVVFGADIIVGFPTETEEMFNDT
VRLIEEANISYLHVFPYSKREGTPAARMPQVVQEVKKRRVKHLLEFAEKRLHDFYSTLLH
TKQSVVVEKSGTGRAENFALVKFLDDNVQLQSIVEVEIKRVEGNYLVGQVFV

NT seq 1239 nt +upstreamnt +downstreamnt
atgagtgacgtaattacctttggatgtagattaaatttttatgaaagtgaagttataaaa
aataacttaaaaaaggctcagttggatgatgttatagttgttcatagttgtgctgtaact
aatgaagctgaacgtcaagtaaagtctaggatacgtaaactttatagagataatgctaat
gttaaaattattgtagcaggctgtgctgttcaattaaatcctgagttatatgttaatatg
ccaggagtaattaaggtattaggtaatcaggataaacttaaatatgagagttatcttgct
aaggataaaattattgtaagtaagatagagaattcaaaagaagttgtgcaagattcagtt
aaaggattttctggcaaatctagagcattaattgaaattcaaaatggatgtaatcatgaa
tgtactttttgtgtaattacaaaggcaagaggtaataaccgttctctatatatagaagac
attatcactaaagttaaagcttgtgttgataatgggtataatgaagttgtgtttactggg
gtagatataagtgattttggattagatatttatggacaacgtgttcttgggacaatgata
aaaagagtattgagtgccgttccacagttgcgtagattgagattatcatccatagatgta
gcagaaatagaggatgatcttattaatattattattaatgagcctagatttatgccacac
ttacatctaagcttacaatcaggaaataatttaatccttaaaagaatgaagcgtagacat
agtagagagcaggtaatagagttttgtaataaaataactagtaaaaggaaagaagtagta
tttggggctgatattatagtaggattccctacggaaactgaagagatgtttaatgataca
gtgagattgatagaagaagcaaatatttcttatctacatgtttttccatattcaaagaga
gaaggtaccccagctgctagaatgccacaagttgtacaagaagtgaagaaaagacgtgta
aaacacttattagagtttgctgagaaaagattgcatgatttttatagtactctgttacat
acaaagcaaagtgttgtagttgaaaagtcaggaactggtagagcagaaaattttgctttg
gtgaaatttttggatgataatgttcaattgcaaagtattgttgaagtggaaataaaaaga
gtagaaggcaattatttagtaggtcaggtatttgtttag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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